Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01484 ATGTTTGGGTACTTAGAAAACAGCAAGGAAAGTCTGATGGAGAACAAGGTCTGGTCTTTAGTTTTTATCTGCTGGGTCCTGTTGGTTCAGCCATTGTGTCTGGTTTGTGCTAACATGGAAGGTGATGCTTTGCATAGCCTGAGGACAAACCTACAGGATCCTATTAACATTCTGCAAAGTTGGGATCCTACTCTTGTCAATCCCTGCACATGGTTTCATGTAACATGCAACAATGATAATAGTGTCATAAGAGTTGATCTTGGAAATGCTGCATTGTCTGGTCAACTTGTTCCTCAGCTTGGCCTGCTCAAAAATTTGCAATACTTGGAACTTTACAGCAACAACATTAGTGGTCCAATACCTAGTGAATTGGGGAATCTCACCAGCTTAGTCAGCTTAGATCTTTACTTGAACAGTTTCTCTGGTCCTATTCCAGACACATTGGGGAAACTATCAAAATTGCGGTTTCTCCGGCTGAATGATAACAGTCTAACAGGTCCTATTCCTATGTCATTGACCAATATCTCCTCACTCCAAGTGTTGGATTTGTCCAACAACCATCTATCAGGAGTGCTTCCGGATAATGGGTCCTTTTCCTTATTCACTCCCATCAGTTTTGCAAATAACGTGGGTCTCTGCGGGCCAGTTACTGCACACCCTTGCCCTGGATCTCCTCCATTTTCACCGCCTCCTCCATTTGTTCCACCACCACCAATCTCTGCTCCAGGAGGAAGCTCAGTGGCAGGGACAATTGCTGGAGGAGTAGCTGCAGGTGCTGCTTTATTGTTTGCTGCCCCTGCAATTGTATATGCATGGTGGCGTCGAAGGAAACCACAAGAGTTTTTCTTTGACGTACCTGCTGAAGAGGATCCTGAAGTTCATCTTGGGCAGCTTAAAAGATTCTCACTGAGAGAGCTGCAAGTTGCTACGGATAGCTTTAGCAATAAAAACATTCTAGGGAGAGGGGGATTTGGTAAAGTTTACAAGGGGCGTCTGGCAGATGGTACGTTGGTAGCTGTGAAAAGATTAAAGGAGGAGCGGACACCTGGTGGAGAGCTTCAGTTTCAAACTGAAGTGGAGATGATCAGCATGGCTGTGCATCGGAATCTTCTTCGACTGCGAGGATTCTGTATGACCCCAACTGAAAGGCTGCTTGTTTATCCTTATATGGCTAATGGAAGTGTTGCATCATGTTTAAGAGAACGCCCTCCATCTCAACCTCCCCTTGATTGGCCAACACGAAAGCAGATTGCTTTGGGATCTGCTAGAGGTCTTTCTTATTTGCATGATCATTGTGACCCGAAGATTATTCATCGTGATGTGAAAGCTGCTAATATATTATTAGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTGGCAAAACTTATGGACTACAAGGACACTCATGTGACAACAGCTGTTCGGGGCACAATTGGGCATATAGCTCCAGAGTACCTATCTACTGGGAAATCTTCTGAGAAAACTGATGTTTTTGGTTATGGTATTATGCTTCTGGAGCTGATAACTGGACAAAGAGCTTTTGATCTTGCTCGGCTTGCAAACGATGATGATGTGATGTTGCTTGATTGGGTGAAAGGTTTATTGAAAGAGAGAAAGCTGGAAATGCTTGTTGATCCTGATCTCCAGAACAATTACATTGAAGCTGAGGTAGAGCAGCTAATCCAAGTAGCATTGCTGTGCACGCAAGGGTCCCCAATGGACAGGCCAAAGATGTCAGAAGTGGTAAGAATGCTTGAGGGTGATGGCTTAGCAGAGAGATGGGATGAGTGGCAAAAGGTGGAAGTACTTCGACAAGAAGTGGATCTTGCTCCTCATCCCAATTCTTATTGGATTGTAGACTCAACTGAAAATCTGCATGCAGTTGAATTATCTGGTCCTAGGTGA 1911 0.4453 MFGYLENSKESLMENKVWSLVFICWVLLVQPLCLVCANMEGDALHSLRTNLQDPINILQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGPIPSELGNLTSLVSLDLYLNSFSGPIPDTLGKLSKLRFLRLNDNSLTGPIPMSLTNISSLQVLDLSNNHLSGVLPDNGSFSLFTPISFANNVGLCGPVTAHPCPGSPPFSPPPPFVPPPPISAPGGSSVAGTIAGGVAAGAALLFAAPAIVYAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKERKLEMLVDPDLQNNYIEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVDLAPHPNSYWIVDSTENLHAVELSGPR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01484 636 Gene3D Phosphorylase Kinase; domain 1 282 389 - -
Pte5g01484 636 FunFam Somatic embryogenesis receptor kinase 1 36 223 - -
Pte5g01484 636 Gene3D Ribonuclease Inhibitor 36 223 IPR032675 -
Pte5g01484 636 FunFam Somatic embryogenesis receptor-like kinase 1 390 607 - -
Pte5g01484 636 SUPERFAMILY Protein kinase-like (PK-like) 292 588 IPR011009 -
Pte5g01484 636 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Pte5g01484 636 SMART serkin_6 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01484 636 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Pte5g01484 636 FunFam Somatic embryogenesis receptor kinase 1 282 389 - -
Pte5g01484 636 ProSiteProfiles Protein kinase domain profile. 313 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01484 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Pte5g01484 636 SUPERFAMILY L domain-like 36 202 - -
Pte5g01484 636 Gene3D Transferase(Phosphotransferase) domain 1 390 607 - -
Pte5g01484 636 Pfam Leucine Rich Repeat 177 194 IPR001611 GO:0005515
Pte5g01484 636 CDD STK_BAK1_like 319 590 - -
Pte5g01484 636 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 19 598 - -
Pte5g01484 636 Pfam Protein kinase domain 314 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01484 Pte-Chr5 37212408 37221280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01484 20 637 Receptor kinase-like Gene Family AT1G71830 88.084 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte5g01484 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01484 K13418 - gmx:100789884 1105.12