Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01476 ATGGACCTGAGGTTCAACACTGGGAAATCCACGACGCCATTCTCAGATATAGACCAGATGCCGGAGACACCTCAACGTGGGTCCCACCACCGCAGGTCCCACTCCGACACTTCCTTCCGTTTTGCAGCTTCCAACCTCGACGACCTGCTGTTGTTTGACGCTTCCGACCTGGACTTCTCTGCTTTAGCAGCTTCGCAGAGTCTGACGCCGACGCCGACCAATAGTTCGGCTCCTCCGCATGGGACTCCCATGCCCGTTGACTCGCACGGCAAATCCAACTCTAATAATTTGTCTTCGGATGAGTCAAGTGGTCAACCAGTTTACATACCTGGTCAGACGCGTCCGCCCCATGGTCACCTTCGGAGCCTCTCGATGGACTCCGATTTCTTTGAGGGGTTGTCACTCAACGATGCGTTTTCTGGGGAGAAGAGGTCTACCAGCCACAGGCACAGCAATTCCATGGATGGTTTACCGGCGTCTTTTGAAGCCGAGTCGTCTCTAGGTGCTGTCTTTGACGGTGCCAAGAAGGCCATGGGGAATGACAAAATCGCCGAGCTTGCTCTTATGGACCCCAAAAGAGCCAGAAGAATTCTTGCAAATAGGCAATCTGCTGCCCGATCTAAAGAGCGGAAAATTCGTTACACTGGTGAGCTGGAAAGGAAGGTTCAGACTCTTCAAAATGAAGCAACCACTCTCTCTGCTCAGGTCACTGTGCTTCAGAGAGACACAACTGGTTTGACTGCTGAAAATAAAGAGCTTAAATTGCGATTGCAAGCCATGGAGCAGCAAGCGAAACTTAGAGATGCTCTAAATGAAGCATTGAAGGAAGAGTTGCAACACCTTAAAATAGCAGCAGGCCATGTTGTTGCAGTCAATGGCAATCCTTTTAACAGGGGTTTACCCCCTCAATTCCCCGCATCCCAACCAGCTTCATATCAGTTTCACAACCCCCAAGCAGAGCAATCAGGTATGAGGAGGCCGTTGTCATCCTCTGGCAATCACTCATTCAACAGGCAGCCCCACCCTAGCTTTATGGACTTCAATCAGAGGACTTAG 1056 0.5085 MDLRFNTGKSTTPFSDIDQMPETPQRGSHHRRSHSDTSFRFAASNLDDLLLFDASDLDFSALAASQSLTPTPTNSSAPPHGTPMPVDSHGKSNSNNLSSDESSGQPVYIPGQTRPPHGHLRSLSMDSDFFEGLSLNDAFSGEKRSTSHRHSNSMDGLPASFEAESSLGAVFDGAKKAMGNDKIAELALMDPKRARRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTVLQRDTTGLTAENKELKLRLQAMEQQAKLRDALNEALKEELQHLKIAAGHVVAVNGNPFNRGLPPQFPASQPASYQFHNPQAEQSGMRRPLSSSGNHSFNRQPHPSFMDFNQRT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01476 351 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Pte5g01476 351 MobiDBLite consensus disorder prediction 68 123 - -
Pte5g01476 351 MobiDBLite consensus disorder prediction 1 22 - -
Pte5g01476 351 Pfam Basic region leucine zipper 190 241 IPR004827 GO:0003700|GO:0006355
Pte5g01476 351 SUPERFAMILY Leucine zipper domain 192 244 IPR046347 GO:0003700|GO:0006355
Pte5g01476 351 CDD bZIP_plant_RF2 193 242 IPR044759 GO:0003700|GO:0006355
Pte5g01476 351 Gene3D - 191 244 - -
Pte5g01476 351 FunFam Transcription factor VIP1 191 244 - -
Pte5g01476 351 MobiDBLite consensus disorder prediction 317 351 - -
Pte5g01476 351 MobiDBLite consensus disorder prediction 87 109 - -
Pte5g01476 351 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 23 331 - -
Pte5g01476 351 Coils Coil 215 279 - -
Pte5g01476 351 MobiDBLite consensus disorder prediction 1 36 - -
Pte5g01476 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 253 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01476 Pte-Chr5 37108422 37112820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01476 8 350 bZIP Transcription Factor Family AT1G43700 51.240 2.48e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte5g01476 bZIP_2 9.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01476 K20557 - qsa:O6P43_004198 374.785