Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01475 ATGACAAGGGAAGTAAAGCAAGATAGCCAATCCAATTGTGCAGTAGACGAACATCTAGAGAAAGATGATTCAGGGGGAAAAGCAACAAAAGGGAGATTGCTTGATAAAGATGATGAGCGTTCTCTTGACTCTGAGGACCCTAACTATTACAGCACTGAGGAAGATGAATGCTCAGACCTGAAAGAATTAGATAAAGATCTGGAAGAATACAAGAAGAAAGCTGTAGTAATAGTGGAGGAGTACTTTGCAACTGATGATGTTGCCGGAACAGCAAATGAACTGAGGGAACTTGGGATGCCAGAGTTCAGCTACTATTTTGTGAAAAAGCTCGTCTCCTTAGCAATGGATAGGCATGACAAGGAAAAAGAAATGGCTGCTGTGCTGTTATCTGCACTATATGCTGATACCATTGAGCCCAAACAAGTATACAAGGGATTCTGTAAATTAATTGAATCTGCAGATGATTTGATTGTGGATATACCGGATACTGTCGATGTTCTTGCGCTATTTATAGCACGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTCAAAAAAACAGATGGCTCAATTAGATAAAGATTCAAAAGGGGTTGAAGTTTTGAAAAGAGCAGAAAAGACCTACCTAGCTGCCCCTTTCCATACTGAAATCATAGAGCGGCGATGGGGAGGTAGCAAGAATATGACTGTTGATGAAGTGAAGGCTAGGATACATGATTTGTTGTTGGAGTATGTGGTGAGTAGTGACAAGAAAGAAGCTTGCAGATGCATCAAGGATCTGCAAGTTCCTTTCTTTCACCATGAAATAATCAAACGTGCACTGATAATGGCAATGGAGCAGCGTGGAGCAGAAGGGCGCCTGCTACATTTGCTTAAGGAAGCTGCAGAAGAAGGCGTGATAAACTCAAGTCAAATATCAAAGGGGTTTAGCAGAATGATAGACACTGTTGATGACTTGTCATTAGACATACCAAATGCAAGGCAAATACTGAAGCAACTAATGTCAAAGGCAGCGTCTGAAGGTTGGTTGTCTCTCTCATCTTTGAAATCGCTCTCAGGGGAGCCAGAAGAGAAATCATTGCAACATGGTGATGCCAGCAACTTCAAGATGAAAGTTCAATCTATCATAAAGGAATACTTCTTATCTGGTGACATATTAGAGGTTTGCTGTTGTCTGGAACAAGAGAATAGTACCTGCTCTACTGAACTGAATGCAATATTTATCAAGAGATTGATAACTCTTGCAATGGATAGGAAGAATAGGGAGAAGGAAATGGCTTCAGTTTTGCTTTCATCTCTGTGCTTTCAAGCTGATGATGTTGTAAGAGGTTTTGTAATGTTGATAGAATCAGCAGATGATACAGCTCTAGATAATCCAGTTGTGGTTGAGGATCTGGCAATGTTTCTAGCTAGAGCTGTGGTGGATGAAGTCCTATCCCCACATCAAATGGAAGAGATTGAAACAGAACTTACGGTGCAGGATTCAATTGGTAGCAAAGTTCTGCGAATGGCAAAGTCATTGCTCAAGGCACAACTTTCCGGAGAGAGGATATTGAGGTGTTGGGGTGGAGATGGCAGCAGCAGTCCTGGTTGGGCAGTTGAAAATGTCAAAGACAAAATTGGGAAACTGCTTGAGGAGTTTGAGTCTGGAGGTGATGTCAGCGAAGCTTGTCGCTGCATCAAAGAAATAGGAATGCCATTTTTCCACCATGAGGTTGTGAAAAAATCTATGGTGACAATCATGGAGTTGAAGAATGAAAGGCTATGGCAGTTGCTTGAGCAATGCTTTGAATCAGGATTGATAACCAATTATCAAATGATGAAGGGGTTTGAAAGGGTTGCGGAATCTCTTGATGACTTGGCTTTAGATGTCCCTGATGCTAAGAAACAATTCACATACTATGTTGAAAAAGCAAAATCTGCAGGATGGTTGGACTCTTCATTCTGTTGTAATAAGTCGACCCAATCAGGCCAAGCAGCAAAGAATTGCACCTGCAAATGA 2004 0.4147 MTREVKQDSQSNCAVDEHLEKDDSGGKATKGRLLDKDDERSLDSEDPNYYSTEEDECSDLKELDKDLEEYKKKAVVIVEEYFATDDVAGTANELRELGMPEFSYYFVKKLVSLAMDRHDKEKEMAAVLLSALYADTIEPKQVYKGFCKLIESADDLIVDIPDTVDVLALFIARAVVDDILPPAFSKKQMAQLDKDSKGVEVLKRAEKTYLAAPFHTEIIERRWGGSKNMTVDEVKARIHDLLLEYVVSSDKKEACRCIKDLQVPFFHHEIIKRALIMAMEQRGAEGRLLHLLKEAAEEGVINSSQISKGFSRMIDTVDDLSLDIPNARQILKQLMSKAASEGWLSLSSLKSLSGEPEEKSLQHGDASNFKMKVQSIIKEYFLSGDILEVCCCLEQENSTCSTELNAIFIKRLITLAMDRKNREKEMASVLLSSLCFQADDVVRGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLSPHQMEEIETELTVQDSIGSKVLRMAKSLLKAQLSGERILRCWGGDGSSSPGWAVENVKDKIGKLLEEFESGGDVSEACRCIKEIGMPFFHHEVVKKSMVTIMELKNERLWQLLEQCFESGLITNYQMMKGFERVAESLDDLALDVPDAKKQFTYYVEKAKSAGWLDSSFCCNKSTQSGQAAKNCTCK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01475 667 MobiDBLite consensus disorder prediction 1 47 - -
Pte5g01475 667 ProSiteProfiles MI domain profile. 233 354 IPR003891 -
Pte5g01475 667 SUPERFAMILY ARM repeat 229 352 IPR016024 -
Pte5g01475 667 Gene3D - 56 210 - -
Pte5g01475 667 Gene3D - 358 512 - -
Pte5g01475 667 FunFam programmed cell death protein 4 358 513 - -
Pte5g01475 667 Pfam MA3 domain 71 181 IPR003891 -
Pte5g01475 667 Pfam MA3 domain 235 344 IPR003891 -
Pte5g01475 667 Pfam MA3 domain 369 479 IPR003891 -
Pte5g01475 667 Pfam MA3 domain 538 646 IPR003891 -
Pte5g01475 667 SUPERFAMILY ARM repeat 533 651 IPR016024 -
Pte5g01475 667 ProSiteProfiles MI domain profile. 69 190 IPR003891 -
Pte5g01475 667 PANTHER PROGRAMMED CELL DEATH 4 8 649 IPR039778 GO:0045892
Pte5g01475 667 SUPERFAMILY ARM repeat 66 227 IPR016024 -
Pte5g01475 667 ProSiteProfiles MI domain profile. 368 489 IPR003891 -
Pte5g01475 667 SMART ma3_7 537 646 IPR003891 -
Pte5g01475 667 SMART ma3_7 369 480 IPR003891 -
Pte5g01475 667 SMART ma3_7 234 345 IPR003891 -
Pte5g01475 667 SMART ma3_7 70 181 IPR003891 -
Pte5g01475 667 FunFam programmed cell death protein 4 60 212 - -
Pte5g01475 667 Coils Coil 53 80 - -
Pte5g01475 667 Gene3D - 520 653 - -
Pte5g01475 667 Gene3D - 220 352 - -
Pte5g01475 667 ProSiteProfiles MI domain profile. 536 655 IPR003891 -
Pte5g01475 667 MobiDBLite consensus disorder prediction 1 57 - -
Pte5g01475 667 SUPERFAMILY ARM repeat 367 526 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01475 Pte-Chr5 37103789 37107623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01475 528 646 Eukaryotic Initiation Factors Gene Family AT5G57870 30.328 1.01e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01475 - - qsa:O6P43_008043 975.311