Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01460 ATGGAGGCAGATATGTCACATGGTGGTTTGATTCCTAATGGGAATCCTTATGGTGGATTTGATCTGCAACAGCAAATGAGGATACAACATCAAGCACATAAGCCAAGCACCATAAACCAACACCAAGGCCATGCCCGTCAAGGGTCTTGTGTGCGACATGCTGTTCAAGATAGCTTTCCACTCACTATGGGTACTGGACCACACTCTGACCAGAGTATTTCATTAGCAGAATTTGGTAGGGGTGACAAGAGCAAGAATTCAGCAAGTGAGGACGATGAGCCAAGCTTTAATGAGGAGGCTATTGATGCCCACAATGACGGGAACAGAGCCAAAAAAGGGTCAACTTGGCAGCGTGTTAAGTGGACTGATAATATGGTGAAGCTCTTGATTAATGCTGTTTCTTACATTGGCGATGATGCGGGTTCAGATTGTGGCAATGGGGGAAGAAGGAAATTCGTTGTTCTACAGAAAAAGGGAAAGTGGAAATCGATTTCAAAGGTCATGGATGAAAGGGGTTATCACGTGTCACCCCAGCAATGTGAGGATAAATTTAATGACCTTAATAAAAGGTACAAGAAACTGAATGATATGCTTGGAAGGGGCACCTCATGTAAGGTTGTTGAGAATCCTGCACTTTTGGATATGATAAATTATCTCTCAGATAAAGAAAAGGAGGATGTTCGTAAAATACTAAGCTCCAAGCACCTTTTCTATGAGTCAATGTGCTCATACCACAATGGGAACAGGCTGCACCTGCCCCATGACCCAGCACTGCAACGATCATTGCAGGCTGCTCTTAGAAGTCGAGATGATCATGATAATGAAGATGTCAGGAGAAATCGCCATGATAATCTTGATGAAGATGATCAAGATGTGGAAACTGATGACCAGGATGATTTAGAAGAGCATCATGCTTCTCATGCTGATAATAGAATGTTATATGGAGGATTACCTGGGTCCATGAAGAAGGTTAGACAATGTCAAGACCAAGAAGATTTTACCTTCGGAAGTCCCTTGAATTCTCAGGAATACAATAAAGTTTCTTGTTCGCACCTGCAAACTAGCCAAGCTGATATGAGTCAAGTCTTACCAGAAAGCATGAGATCAGCCTGGCTACAGAAACATTGGATGGAATCTCGCTCACTTCAGTTAGAAGAACGGAAATTGCAAATTCAAGTAGAGATGTTAGAATTAGAGAAACAGAGACTCAAGTGGCAGAAATTCAGCAAGAAAAGAGACCAGGAATTTGAGAAGATGAGAATGGAAAATGAACGGATGAAGCTTGAAAATGAGCGGATGGCATTAGAATTGAAACGAAAGGAAATTGAATCGGGCTTTAAGTAG 1344 0.4204 MEADMSHGGLIPNGNPYGGFDLQQQMRIQHQAHKPSTINQHQGHARQGSCVRHAVQDSFPLTMGTGPHSDQSISLAEFGRGDKSKNSASEDDEPSFNEEAIDAHNDGNRAKKGSTWQRVKWTDNMVKLLINAVSYIGDDAGSDCGNGGRRKFVVLQKKGKWKSISKVMDERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCKVVENPALLDMINYLSDKEKEDVRKILSSKHLFYESMCSYHNGNRLHLPHDPALQRSLQAALRSRDDHDNEDVRRNRHDNLDEDDQDVETDDQDDLEEHHASHADNRMLYGGLPGSMKKVRQCQDQEDFTFGSPLNSQEYNKVSCSHLQTSQADMSQVLPESMRSAWLQKHWMESRSLQLEERKLQIQVEMLELEKQRLKWQKFSKKRDQEFEKMRMENERMKLENERMALELKRKEIESGFK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01460 447 Gene3D - 121 193 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 1 20 - -
Pte5g01460 447 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 263 317 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 29 113 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 83 113 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 265 287 - -
Pte5g01460 447 Pfam Myb/SANT-like DNA-binding domain 118 243 IPR044822 -
Pte5g01460 447 Coils Coil 379 406 - -
Pte5g01460 447 Coils Coil 411 445 - -
Pte5g01460 447 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01460 Pte-Chr5 36973307 36975670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte5g01460 Myb_DNA-bind_4 1.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01460 - - cave:132185782 646.736