Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01459 ATGCTGGGGGACTCAACTGTGTTGGGAGCTGCAGGCAGCTCTGCAGATGCAGCAGCAAAAGCCGGAGGAGGAGGAGAAAGCCATGAAGGTGGCGAGACCTCGGCTGCTGCTACTGCAGCTGGAGGTGCAGGGGGGGTGAGATCGGATTCAGGTGACGATGAAAGAGGAGGAGGAGGTGAAGAAGGTGACAGAAGTTTCGGTGGCAATCGGTGGCCTCGTCAGGAAACTTTGTCACTCTTGAAGATACGGTCTGATATGGACGTTGCATTCAGAGATGCTAGTATGAAAGGTCCTTTGTGGGAAGAAGTGTCCAGGAAGCTAGCAGAATTTGGATATAATCGAAGTGCTAAGAAGTGCAAGGAGAAATTCGAAAACGTGTACAAGTATCACAAGAGAACCAAAGAAGGCCGGACAGGCAAGCCGGACGGCAAGGCCTATCGGTTTTTCGATCAATTAGAAGCTCTTGAAAACCTGCCTTCAATGCATTCATCATCCATTATACCTTCAAAGCCACAAGGTGCCTTGCAGGCAACTCCATTGTCAGTGAATACAACAGTGGCAACAACAATGGCTTCAGTGTTTAACAACATCAGTACTACTTCTGTCGTTCCTCATGTCACTGTTCCATCAACAACGGCGACGACAATACCAATGACTACGTCTCATGGCATTGTCAATCCATCAATGAATCTCACATTTTCTTCATACCCCCCACCACCACAGACAAAGTCTACAAATCTTGCACTGTCAATGGCAAACCCTATCTATCCTCCTCCTCCTTCAGCAATAATTCCAAGCACTGCATTCCAAAGCATACCGGCCGATATGCTGTCTAATTCAAGCTCTTCTTCTACTTCTTCAGATGAAGAATTGGAAGGACGGCGAAAGAGGAAGAGGAAATGGAAGGACTTCTTTGAGAGATTAATGAAGGAGGTCATTGATAAACAAGAGGATCTGCAGAACAGATTCTTGGAAGCTATCGAGAAACGCGAACACGATCGAATGGTAAGAGAAGAATCTTGGAGGTCGCAGGAAATGGTGAGGATGACGAGAGAGCGTGAAATTTTGGCACAAGAAAGGTCCATTGCTGCAGCTAAGGATGCAGCAGTGATGTCATTTTTGCAGAAGATAGCTGAACAGCATAATCTCGGCCAAGCATTGAATAACATCAACCTTCCACAACCGCCGCCAGCTCCGCCTCAAGTGCATCAACAGCCAACTCAAGTTCCTCCCCCGCCACAGCAGGTACATCCACAGCCATTTCTTCAACATCAGCAGAAACAGGGTGCCTTAACTCCTTCGCAACAGCAGCTTCCTCAACCGGTGACAAAAAATGTAATCTCAAGTTTGGAATTGACTAAGCCAGATAATTCTGATCAGGATGTCTTGGCGGTAAGCTCATCAAGATGGCCGAAAGTTGAGGTTGAAGCTTTGATAAAGCTTCGCACCAGTTTGGATGCCAAGTACCAAGAGAACGCCCCAAAGGGTCCACTGTGGGAGGAAATCTCAGCAGCCATGAGAAAGATTGGTTACAATAGAAATGCTAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAAGACAACAACAAGAAGAGACCTGAAGATTCAAAGACATGCCCGTATTTCCATCTCTTGGATGCTCTATATAAAGAGAAGAACATATTTGAAAATTCGACCGCTGGGAATAATCAGTTGAAACCAGAGAGCTTGATGAGTAGTACTGGTGCACCATTGATGGTAAGACCTGAACAGCAATGGCCACCCTCGCAAGACATGCGGTTGGAAAGTACCGGACCAGGGCAAGAACGAAATGTGACAATGGAAGACTTGGAAAGTACTGAACCAATGGAGGGACACCATGAGGAGGAGGACGACGACGATGAGGACAAAGATGGAGATGATGAGGATGAGGAAGATGAAGGAGGATGTAACTTTGAGATAGTGGCAAGTAAGCCAGCTTCAGTGGGAGCTGAGTGA 1998 0.4675 MLGDSTVLGAAGSSADAAAKAGGGGESHEGGETSAAATAAGGAGGVRSDSGDDERGGGGEEGDRSFGGNRWPRQETLSLLKIRSDMDVAFRDASMKGPLWEEVSRKLAEFGYNRSAKKCKEKFENVYKYHKRTKEGRTGKPDGKAYRFFDQLEALENLPSMHSSSIIPSKPQGALQATPLSVNTTVATTMASVFNNISTTSVVPHVTVPSTTATTIPMTTSHGIVNPSMNLTFSSYPPPPQTKSTNLALSMANPIYPPPPSAIIPSTAFQSIPADMLSNSSSSSTSSDEELEGRRKRKRKWKDFFERLMKEVIDKQEDLQNRFLEAIEKREHDRMVREESWRSQEMVRMTREREILAQERSIAAAKDAAVMSFLQKIAEQHNLGQALNNINLPQPPPAPPQVHQQPTQVPPPPQQVHPQPFLQHQQKQGALTPSQQQLPQPVTKNVISSLELTKPDNSDQDVLAVSSSRWPKVEVEALIKLRTSLDAKYQENAPKGPLWEEISAAMRKIGYNRNAKRCKEKWENINKYFKKVKDNNKKRPEDSKTCPYFHLLDALYKEKNIFENSTAGNNQLKPESLMSSTGAPLMVRPEQQWPPSQDMRLESTGPGQERNVTMEDLESTEPMEGHHEEEDDDDEDKDGDDEDEEDEGGCNFEIVASKPASVGAE* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01459 665 ProSiteProfiles Myb-like domain profile. 69 127 IPR001005 -
Pte5g01459 665 Coils Coil 302 322 - -
Pte5g01459 665 FunFam Trihelix transcription factor GT-2 470 531 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 596 610 - -
Pte5g01459 665 SUPERFAMILY beta-sandwich domain of Sec23/24 380 442 - -
Pte5g01459 665 Pfam Myb/SANT-like DNA-binding domain 468 555 IPR044822 -
Pte5g01459 665 Pfam Myb/SANT-like DNA-binding domain 69 155 IPR044822 -
Pte5g01459 665 ProSiteProfiles Myb-like domain profile. 468 526 IPR001005 -
Pte5g01459 665 MobiDBLite consensus disorder prediction 392 418 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 1 71 - -
Pte5g01459 665 PANTHER FI21293P1 40 608 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 625 650 - -
Pte5g01459 665 CDD GT1 69 134 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 587 665 - -
Pte5g01459 665 CDD GT1 468 533 - -
Pte5g01459 665 FunFam Trihelix transcription factor GT-2 71 132 - -
Pte5g01459 665 Gene3D - 71 132 - -
Pte5g01459 665 Gene3D - 470 531 - -
Pte5g01459 665 SMART sant 67 129 IPR001005 -
Pte5g01459 665 SMART sant 466 528 IPR001005 -
Pte5g01459 665 MobiDBLite consensus disorder prediction 387 441 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 274 297 - -
Pte5g01459 665 MobiDBLite consensus disorder prediction 419 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01459 Pte-Chr5 36959311 36962385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01459 67 602 Trihelix Transcription Factor Family AT1G76890 44.365 1.29e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte5g01459 Myb_DNA-bind_4 3.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01459 - - qsa:O6P43_004191 635.18