Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01458 ATGCTGGGAGCTGCAGATACAAGTCCATTAGAGAGCTCCGGCGATGCCGTGATGGCGGAAGCTGCTGCCGGGAAGGCTCAGCATGAAGGTGGTGAAAGTGGGAGTGAAGTACTGGTTGGTGTAATCAGACCAAATATTAATAACAATTCAAGTGATGATCAAGAGAAGGGTGCAGCAGCTAAAGGTGATGAAGGTGACAAGGTCAATTGTGGTGGAAACCGGTGGCCCCGGCAAGAGACTTTGGCACTGTTGAAGATAAGGTTGGATATGGATGCTGTCTTTCGTGATTCAAGCTTGAAAGGTCCATTATGGGAAGAGGTGGCAAGGAAATTAGCCCAGCTTGGCTATAAAAGGAGTGCCAAAAAGTGCAAGGAAAAATTTGAGAATGTGTACAAATACCATAAGAGAACCAAAGAAGGTCGTAGTGGAAAGCCTGAAGGTAAGGCCTATAAATTCTTTGATGAGTTACAAGCCCTTGAAAATCAATTCACACTTTCTCATCCAAATCCTCAACACTCTCTTGTAACATCTTCACTAATTCCTCCAAAAAATACTGAATCAGAAAAGGTCTCCCATGTCACTACAACCAACCCCACAGTCATATCCCCGCCACCACCATCACTGCCAGTACCAACAAACCCTACCATTGCTTTCTCCACCGCACCAACCACAATAACAATGAATTCTAGGATCCCTCCTGCACAAAATCCTTATTCATTTCCTGTACCGAACATGTCGTTGAACGTGTTCGCTGGCACGTCGACTTCTTCGTCGACCGCGTCGGATGAAGGATTGGAAGAGAGGTATAGGAGGAAAAGAAAATGGAAGGACTACTTCAGAAGGCTGACGAGGAAATTGGTAGTGAAGCAAGAAGAAATGCAGAAGAGGTTCTTGGAAGCCATAGACAAACGAGATCATGAACGAATGGCACGAGAAGAGTCGTGGCGGATGCAAGAGATGGGGAGAATCAACAGAGAACATGAAATTCTAGTACAAGAACGATCCACTGCAGCAGCTAAAGATGCAGCAGTCATTGCTTTCCTGCAAAAGCTCTCTGGTCAACATAGTCCAATACTTCAGTCATTTTCTCATCAATCACCATCATTGCCTCCAAAACCACAAACACAGACATCAGTAGAATTACCAGTGATTCAGCAGCAGCCAAGGGAAGCAATAGTGTCACCCGCTGCTGCTATGGAGAATGGTGATAGTCCTGGTCCTGCAAGCTCTTCAAGGTGGCCAAAGACTGAAGTTCATGCTTTGATAACGTTAAGGACAAACCTGGATTCTAAGTATCAAGAGAATGCTCCAAAGGGGGCACTGTGGGAGGAGATATCAGAGGGGATGAGGAGGCTTGGATATAACAGAAACGCGAAGAGGTGCAAGGAAAAGTGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAAGAGAGCAACAAGAGGAGGCCTGAGGATGCAAAGACATGTCCTTACTTTCATCAACTAGATGCTATATACAAAGAAAAGAGTAAAACTTCGTCAGAAAATTCAATTGGGGTTTTGTTTCACGATGTGTCAAAGCAAAAGAGCATGGCGGAGCCTTTGATGGTTCCATCGGAACAGCAATGGCGGTCACCTCGACATGATCTGCTGCAGCAGCCGTCGTTCATGGAAGGATTCAGAGTTGAAAATACTAATTATCAATATCAGAATAAAGAGAGAGATCAGGATAATGAAGATGATGATGGGGATGGCGACGAGGATAATGACGACCACGATGATGGAGGCACACTAGTGAAAGTTGAAGGATTGGGGAGTTATGAGATATGCAACTAA 1815 0.4485 MLGAADTSPLESSGDAVMAEAAAGKAQHEGGESGSEVLVGVIRPNINNNSSDDQEKGAAAKGDEGDKVNCGGNRWPRQETLALLKIRLDMDAVFRDSSLKGPLWEEVARKLAQLGYKRSAKKCKEKFENVYKYHKRTKEGRSGKPEGKAYKFFDELQALENQFTLSHPNPQHSLVTSSLIPPKNTESEKVSHVTTTNPTVISPPPPSLPVPTNPTIAFSTAPTTITMNSRIPPAQNPYSFPVPNMSLNVFAGTSTSSSTASDEGLEERYRRKRKWKDYFRRLTRKLVVKQEEMQKRFLEAIDKRDHERMAREESWRMQEMGRINREHEILVQERSTAAAKDAAVIAFLQKLSGQHSPILQSFSHQSPSLPPKPQTQTSVELPVIQQQPREAIVSPAAAMENGDSPGPASSSRWPKTEVHALITLRTNLDSKYQENAPKGALWEEISEGMRRLGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDAKTCPYFHQLDAIYKEKSKTSSENSIGVLFHDVSKQKSMAEPLMVPSEQQWRSPRHDLLQQPSFMEGFRVENTNYQYQNKERDQDNEDDDGDGDEDNDDHDDGGTLVKVEGLGSYEICN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01458 604 SMART sant 409 471 IPR001005 -
Pte5g01458 604 SMART sant 71 133 IPR001005 -
Pte5g01458 604 Pfam Myb/SANT-like DNA-binding domain 411 498 IPR044822 -
Pte5g01458 604 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Pte5g01458 604 MobiDBLite consensus disorder prediction 570 585 - -
Pte5g01458 604 CDD GT1 411 476 - -
Pte5g01458 604 Gene3D - 413 474 - -
Pte5g01458 604 Gene3D - 75 136 - -
Pte5g01458 604 MobiDBLite consensus disorder prediction 1 73 - -
Pte5g01458 604 CDD GT1 73 138 - -
Pte5g01458 604 ProSiteProfiles Myb-like domain profile. 411 469 IPR001005 -
Pte5g01458 604 FunFam Trihelix transcription factor GT-2 75 136 - -
Pte5g01458 604 MobiDBLite consensus disorder prediction 558 604 - -
Pte5g01458 604 PANTHER FI21293P1 35 557 - -
Pte5g01458 604 ProSiteProfiles Myb-like domain profile. 73 131 IPR001005 -
Pte5g01458 604 FunFam Trihelix transcription factor GT-2 413 474 - -
Pte5g01458 604 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01458 Pte-Chr5 36944839 36947669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01458 65 505 Trihelix Transcription Factor Family AT1G76890 53.766 5.05e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte5g01458 Myb_DNA-bind_4 1.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01458 - - gsj:114370603 574.704