Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01457 ATGAAGAACGGCAAGCCTTATGCTGTTATGTTTTCCATTCAGTGCATATATGCAGGCTTGGCCTTATTGTCCAAGGTTGCAATTTCTAAAGGAATGGACCCTTCTGTGTTTGTCGTTTACAGACTAGCCTTTGCATCACTTGCCCTAGCACCCTTTGCTTTCTTCTTAGAAAGAAACAACACTTCTCCCGTTTCATTCACATTACTGTGCAAAATATTCCTGACTTCCTTGTGCGGGATTACTTTGAGTTTGAACCTGTATTATGTTGCAATCAACTACACTTCTGCAACATTTTCTGCAGCAACAACGAACACAATCCCTGGTATTACTTTTGTCATGGCTCTTGTACTGAGGATGGAGACCTTGTCCCTGAAACGTTTGCACGGAGTGGCAAAGCTGTTAGGTTCTGTTGTAAGCTTTTCTGGGGCAATAGTGTTTGCTTTGGTTAAAGGAGCCCCTCTCACAAGCTGGTACCCTTCAACTCAGATGCAAAACCATCAAGATGGGTCTAAAGAGGAATATATCAAAGGCCCTCTTATGATGCTCTCAGCCAACACTTGTTTTTCTCTATGGCTCATTTGCCAGGGACTACTCATGAAGCAGTATCCAGCAAAATTACGCTTGACTACTCTCCAGTGTGTCTTTAGCTGCATACAGTCTGCTGTGTGGGCTGTTTCAGTGCAGAGGAACCCAGAAGCTTGGAAGCTTGGATGGGATGTTCATCTCATTTCAGTGGCATACTGTGGTTTGCTTGTGACAGGAGTAACGTATTGGCTACAAGCCTATGCCATAGAGGAGAAAGGGCCAGTTTTTGCATCCGCATTCACCCCATTGGCACTCACAATCACAGCCATTGCCTCAGCAATCCTGTGGAAAGAAACCCTTTACTTGGGAAGTGTGGGCGGGACCATTTTGCTAGTGATTGGGCTGTATAGCGTTTTGTGGGGGAAGATAAAGGAAGACTGTGAAAAGAGGAACAAAATCCATGAAGACAGACATGAACCAAAACAAGACATGCAATTAAGGAGCATCCGTACTGTTGTTCAATGA 1050 0.4438 MKNGKPYAVMFSIQCIYAGLALLSKVAISKGMDPSVFVVYRLAFASLALAPFAFFLERNNTSPVSFTLLCKIFLTSLCGITLSLNLYYVAINYTSATFSAATTNTIPGITFVMALVLRMETLSLKRLHGVAKLLGSVVSFSGAIVFALVKGAPLTSWYPSTQMQNHQDGSKEEYIKGPLMMLSANTCFSLWLICQGLLMKQYPAKLRLTTLQCVFSCIQSAVWAVSVQRNPEAWKLGWDVHLISVAYCGLLVTGVTYWLQAYAIEEKGPVFASAFTPLALTITAIASAILWKETLYLGSVGGTILLVIGLYSVLWGKIKEDCEKRNKIHEDRHEPKQDMQLRSIRTVVQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01457 349 Pfam EamA-like transporter family 7 138 IPR000620 GO:0016020
Pte5g01457 349 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020
Pte5g01457 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 138 - -
Pte5g01457 349 PANTHER WAT1-RELATED PROTEIN 5 326 IPR030184 GO:0016020|GO:0022857
Pte5g01457 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01457 Pte-Chr5 36930107 36932333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01457 1 341 Nodulin-like Gene Family AT5G07050 35.537 9.45e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01457 - - vvi:100247036 433.335