Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01449 ATGATGTTAATTTTTTCATCAGCATTAGCGTTGATGTTTTCTTTTTGGATGGTGAAGGTAGGTGAGGATATCCCACAGGAATTTGAGCACCTCAGGCACGGTTCATTAGGATTTTTTCCCAGGAAGCGAGCTTCTCGCCAAAGAAGAAAAGTGAAGACCTTTCCTAAGGATAACCAATCGGAGAAATGCAGGTTGACTTCCTTGTTGGGATACAAGACTGGTATGACTCACATTGTCAGGGAGGTGGAAAAGCCTGGATCTAAGCTCCACAAGAAGGAGACATGTGAGGCAGTCACCATTATTGAGACTCCTCCCGTGGTTGTTGTTGGTGTTGTGGGCTACGTAAAAACTCCTCGTGGGTTGTGCAGCGTAAACACTGTCTGGGCTCAGCATCTTAGTGAAGAGGTTAGGCGTAGGTTCTGCAAGAACTGGTGCAAGTCCAAGACGAAGGCAAGGAAGAAGAACATTGAAGCCCAGCTTGAGAAAATCAAGAAGTATGCATCTGCTGTCCGTGTTTTGGCTCACACTCAGATTAGAAAAATGAAGGGACTGAAGCAAAAGAAAGCACATCTCATGGGAATCCAGGTCAATGGTGGTACTGTCGCCCAGAAAGTTGACTTTGCTTACAGCTTCTTTGAAAAGCAAGTGCCTGTTGATGCTGTCTTTCAGAAGGATGAAATGATTGATATCATTGGTGTGACCAAGGGAAAAGGCTATGAGGGTGTGGTTACCCGTTGGGGCGTTACCCGTCTTCCCTGCAAAACCCACAGAGGCCTGCAAAAGGTTGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTCTCTTTTACAGTTGCCAGGGCTGGTCAGAAAGGGACTGAGAAAGACATTACTCCAATGGGTGGTTTCCCTCACTATGGTATCGTGAAGGATGATTATTTGTTGATCAAGGGATGCTGTGTTGGACCAAAGAAGAGGGTTGTCACACTTCGTCGGTCTCTAGTCAAGCAGACATCTCGGTTGGCTCTTGAGGAGATCAAACTGAAGTTCATCGACACGTCCTCAAAGTTTGGCCATGGTCGATTCCAGACCACCCAAGAGAAGCAGAAGTTCTATGGAAGGGTCAAGGTCCACGCTCGTTTGCTTTATGTACTACGCAAAAGTTTTGCAATGGGAATTTTGTTCAGAAATTTATCGGTGTTCTTGGTTGTCTTTATCGTTGGTTTACGAAACCAACCGATCTGA 1221 0.4586 MMLIFSSALALMFSFWMVKVGEDIPQEFEHLRHGSLGFFPRKRASRQRRKVKTFPKDNQSEKCRLTSLLGYKTGMTHIVREVEKPGSKLHKKETCEAVTIIETPPVVVVGVVGYVKTPRGLCSVNTVWAQHLSEEVRRRFCKNWCKSKTKARKKNIEAQLEKIKKYASAVRVLAHTQIRKMKGLKQKKAHLMGIQVNGGTVAQKVDFAYSFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPCKTHRGLQKVACIGAWHPARVSFTVARAGQKGTEKDITPMGGFPHYGIVKDDYLLIKGCCVGPKKRVVTLRRSLVKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVKVHARLLYVLRKSFAMGILFRNLSVFLVVFIVGLRNQPI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01449 406 Gene3D Translation factors 213 372 - -
Pte5g01449 406 FunFam 60S ribosomal protein L3 66 177 - -
Pte5g01449 406 Gene3D Ribosomal protein L3, domain 3 25 109 IPR044892 -
Pte5g01449 406 FunFam 60S ribosomal protein L3 236 284 - -
Pte5g01449 406 Coils Coil 146 166 - -
Pte5g01449 406 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 32 284 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pte5g01449 406 FunFam 60S ribosomal protein L3 181 370 - -
Pte5g01449 406 SUPERFAMILY Translation proteins 27 350 IPR009000 -
Pte5g01449 406 Pfam Ribosomal protein L3 285 350 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pte5g01449 406 Pfam Ribosomal protein L3 26 284 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pte5g01449 406 ProSitePatterns Ribosomal protein L3 signature. 222 245 IPR019926 -
Pte5g01449 406 Gene3D - 110 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01449 Pte-Chr5 36863565 36866446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01449 26 367 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 74.479 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01449 K02925 - zju:107406089 580.867