Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01446 ATGGAAACACAAGCTCAAGAACTGCCCGAATATGTACATATAAATCAAAATGAGATTCTGGTTCGAAGGCATAAAAAGGTAAAGGAGGAAGACATTGCTGTTTGCGAGTGCAAATTTAATGTCAGTGATCCTGAAAGTGCTTGTGGTGAGAGGTGCTTAAATGTCCTAACTAGCACTGAATGCACCCCAGAATATTGCCCTTGTGGCTTTTTCTGCAGGAATCAGAGGTTTCAGAAGTGCGAATATGCAAAAACAAGGTTGTTTAGAACTGAGGGTCGTGGGTTTGGTCTTCTTGCTGACGAGACTATAAAGGCAGGGCAATTTGTCATTGAATACTGTGGTGAAGTGATATCATGGAAGGAAGCCAAGCACAGATCTCAGACTTATGAACTTCAAGGTCTCAAGGATGCATATATTATATCTCTCAATGTCTCTGAATGTATTGATGCTACTAGAAAGGGAAGCCTGGCCAGATTTATAAATCACTCATGTCAACCAAATTGTGAGACGAGGAAATGGAATGTGTTGGGAGAAATAAGGGTTGGAATATTTGCAAAACAAGACATAACTGTTGGAACTGAATTGTCATATGACTATAATTTTGAGTGGTATGGTGGGGCAAAGGTTCGCTGCCTCTGTGGGGCTCCCAGTTGCTGTGGTTTTCTTGGAGCAAAGTCTCGTGGTTTTCAGGAGGATACATACCTATGGGAAGATGATGATGACCGGTACTCAGTCGAAAAGATTCCACTTTATGACTCTGCAGAAGATGAGCCACTTTCAGAAGTCCTGAAAAATGCGAACTCTATTATGCTTGCAAATGATGGTAACAAAAAAGTCAACAATTGCTTGCTAACGGAGTTTAATGTTGGATTTGGTCAACAATTGGCACTAACTGCTCCTGTTGCAATTGATACTGTAGAGACGAAGGATCTAGATGTAACTGGATTAAGAACAGTAGGAAGAGGTGAAAGTATGGAATTATATTCAGTTGATACTCAGCAAGCATTTTCACCAAAAAATGCTGTGGTTTCGCATATTGAAAGTAATACTGCTTGCCGAAAGTATAAGATTAGAACCACTCCATTGCCTAGAAAACGATCAAAAAAATTTAAAAAGGGAAGATTGAAGAAAATCATGGAGAAGCAAGTTGATGTAAAATCTGCTGTGCAACTTTTGGGGTCAAAGGATGCACAACTGGAGGTTCTAAGATGTGAGGAAGTGAAGAATGATGCTGCTTCTGCTCTTGATTCCTTGTACAATGAAATACGGCCTGCTATAGAAGAACATGAGAGGGATAACCAGGACAGTGTCTCTACTACTGTGGCAGAGAAATGGATCGAAGCTTGTTGCTTAAAATTGAAGGCTGAGTTTGACCTTTATTCTTCAATTGTCAGAAATATTGTTTGCAATCCACAGAGGGAACCTGAGCAAGCTAAACCTGGATTTGATGTTGGAAATGAAATTAAACTTTAG 1473 0.3999 METQAQELPEYVHINQNEILVRRHKKVKEEDIAVCECKFNVSDPESACGERCLNVLTSTECTPEYCPCGFFCRNQRFQKCEYAKTRLFRTEGRGFGLLADETIKAGQFVIEYCGEVISWKEAKHRSQTYELQGLKDAYIISLNVSECIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKQDITVGTELSYDYNFEWYGGAKVRCLCGAPSCCGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPLYDSAEDEPLSEVLKNANSIMLANDGNKKVNNCLLTEFNVGFGQQLALTAPVAIDTVETKDLDVTGLRTVGRGESMELYSVDTQQAFSPKNAVVSHIESNTACRKYKIRTTPLPRKRSKKFKKGRLKKIMEKQVDVKSAVQLLGSKDAQLEVLRCEEVKNDAASALDSLYNEIRPAIEEHERDNQDSVSTTVAEKWIEACCLKLKAEFDLYSSIVRNIVCNPQREPEQAKPGFDVGNEIKL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01446 490 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0042054
Pte5g01446 490 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Pte5g01446 490 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Pte5g01446 490 SUPERFAMILY SET domain 9 220 IPR046341 -
Pte5g01446 490 SMART set_7 83 206 IPR001214 GO:0005515
Pte5g01446 490 Pfam SET domain 94 200 IPR001214 GO:0005515
Pte5g01446 490 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0042054
Pte5g01446 490 PANTHER SET DOMAIN PROTEINS 7 447 - -
Pte5g01446 490 FunFam Histone-lysine N-methyltransferase 1 235 - -
Pte5g01446 490 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0042054
Pte5g01446 490 Gene3D SET domain 1 235 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01446 Pte-Chr5 36832936 36838220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01446 60 222 C2H2 Transcription Factor Family AT2G23740 34.946 1.11e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte5g01446 SET 8.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01446 - - qsa:O6P43_004165 693.345