Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01444 ATGGAAAATGAGTTTGTGGGGAATAGAGGTTTTGCCAAGCCAAGACAATCAACAGTTCAGAGATATACATTTGTGGAGTTTAATAGGTTATACGTGGATGAAACTCTAAAGAGAGATGCTGAGAATATTGATGCATCATCAACAAGCTCAGGTAAAAAGCATAGTAAGACTGAAATGAATGGTGGTGGAGTGGAGGAAGGAAAAGGATTTGAAAAGTTCAACAAGGAACATGTGAGAAGAGATGGCAGACGCAGCAGAAGTGCCAAGTGGAAGAAGCAAGTTGACGATGAAATGTTGAATGGATGGCCTAAATGGCTTGCTGATAACGTTCCTTCAGAAGTGTTAGCTGCTATGGTTCCTAGGAGTGCTGAATCATACATTAAGATTGATAAGGTAGGACAAGGAACTTACAGTAACGTGTTCAAAGCACGAGATCGTGATACTGGGAAAATTGTTGCCCTAAAGAAGGTAAAGTTCGACACATCAAAACCTGAGAGTATCAAATTTATGGCTAGAGAAATCATGATTTTACAAAAACTGGATCATCCAAATATAGTCAAGCTTGAAGGATTGGCCACGTCGAGGTTGCATTATAGTCTATACCTAGTGTTTGATTACATGCAAACAGATTTGGCAAGGATTATTTCTCGTTCTGAAGAGAGACTTACCGAACCACAGGTGAAGTGCTATATGATGCAGTTACTCTCAGGCCTAGAGCACTGTCACGAAAGAGGAATTCTGCATCGTGATCTCAAAGGATCAAACATTTTAATTGATAAAGATGGGATGCTTAAGATAGCAGATTTTGGATTAGCAAATTTTTATGCTTGCAGAAATAAGCCGTCATTGACAAATAGAGTTGTCACTCTGTGGTACCGAGCTCCTGAGTTGTTGCTGGGTGCTACAGATTACGGAGTAGGTATCGATCTGTGGAGTGCTGGATGTCTGTTGGCAGAAATGTTTACAGGATATCCAATAATGTCTGGCAGATCAGAGGTTGAGCAGTTATATAAAATCTTCAAACTATGTGGGACACCTACAGAGGAATATTATAGAAAGTTAAAACTCTCTACAAATCTCAAACCTCCAAAGTCTTATAAACCTACCCTTTTGGAAACTTTCAAGTATCTTCCTTCATCTTCACTGCGCCTATTAAGCACTTTGCTTGCTTTAGATCCTGCATATCGCGGCCGTGCATCTTCAGCCCTGAGCAATGAGTTCTTTTCCACAAGGCCATTGGCATGCTCCCTCTCAGGTCTCCCTGTAATCGACAAAGAGAAGGAAGAGCAAATAGAAGCAGCTGAACAGATGAAGTACATGAATTCTACAATGAAAAGAAGGTCTCAAAAATACCGTGATCGCAGTAAGAAAGAGCTGCCACCACCAAATTATGCAGAAGAAAAATTATATAAAGAAGAGGTGATGAACAGGACAGATGAAACATATGTGTCAAGTGAAGAGACTGGCAGTGCAATCAGCAGTACCTCCTCTGGTACTAACTCAGCTCAGTTGGAAAACAACACTTTCTCCATTTTCTCCCCAATAACATCTTCATATCAAAAAATGGCTCGCAAACCCAGTCACCATTCCAATGGTGGTCATATGCTGGCCGATTCTCCACCAGGCAATCCAAAAACAGAAGGTACCTACGGCTACAGGAAACCTGATTTTGTGTACAGATCAAAACATGTCAACAGGTCAGTACCCTCGAGAATCTATAGGGCTTCAATGAAAGGCAGCACCTAG 1746 0.4107 MENEFVGNRGFAKPRQSTVQRYTFVEFNRLYVDETLKRDAENIDASSTSSGKKHSKTEMNGGGVEEGKGFEKFNKEHVRRDGRRSRSAKWKKQVDDEMLNGWPKWLADNVPSEVLAAMVPRSAESYIKIDKVGQGTYSNVFKARDRDTGKIVALKKVKFDTSKPESIKFMAREIMILQKLDHPNIVKLEGLATSRLHYSLYLVFDYMQTDLARIISRSEERLTEPQVKCYMMQLLSGLEHCHERGILHRDLKGSNILIDKDGMLKIADFGLANFYACRNKPSLTNRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGYPIMSGRSEVEQLYKIFKLCGTPTEEYYRKLKLSTNLKPPKSYKPTLLETFKYLPSSSLRLLSTLLALDPAYRGRASSALSNEFFSTRPLACSLSGLPVIDKEKEEQIEAAEQMKYMNSTMKRRSQKYRDRSKKELPPPNYAEEKLYKEEVMNRTDETYVSSEETGSAISSTSSGTNSAQLENNTFSIFSPITSSYQKMARKPSHHSNGGHMLADSPPGNPKTEGTYGYRKPDFVYRSKHVNRSVPSRIYRASMKGST* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01444 581 MobiDBLite consensus disorder prediction 442 502 - -
Pte5g01444 581 SMART serkin_6 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01444 581 Pfam Protein kinase domain 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01444 581 FunFam probable serine/threonine-protein kinase At1g54610 113 208 - -
Pte5g01444 581 Gene3D Phosphorylase Kinase; domain 1 114 208 - -
Pte5g01444 581 MobiDBLite consensus disorder prediction 453 480 - -
Pte5g01444 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pte5g01444 581 Gene3D Transferase(Phosphotransferase) domain 1 209 459 - -
Pte5g01444 581 FunFam Putative serine/threonine-protein kinase 209 446 - -
Pte5g01444 581 MobiDBLite consensus disorder prediction 68 89 - -
Pte5g01444 581 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pte5g01444 581 ProSiteProfiles Protein kinase domain profile. 126 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01444 581 MobiDBLite consensus disorder prediction 520 556 - -
Pte5g01444 581 MobiDBLite consensus disorder prediction 43 89 - -
Pte5g01444 581 SUPERFAMILY Protein kinase-like (PK-like) 119 412 IPR011009 -
Pte5g01444 581 PANTHER CELL DIVISION PROTEIN KINASE 124 413 - -
Pte5g01444 581 MobiDBLite consensus disorder prediction 481 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01444 Pte-Chr5 36823087 36828334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01444 121 461 Core Cell Cycle Gene Families AT5G10270 43.056 3.17e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte5g01444 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01444 K08819 - qsa:O6P43_008073 669.848