Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01427 ATGGAGCAGAAGCACATTCTGTTGTCAGCTTTGAGTGTAGGGGTTGGATTAGGAGTGGGGCTTGGTCTGGGTTCAGGACAAGCTGTACAAAAATGGGTTGGAGGGACTAGTTCCTCGGGTGAGATTTCAGCTGAAGATATTGAGAAAGAGCTAATAAGTCAGCTACTGGAAGGCAAAGATAGCAATGTTAGCTTTGACGAGTTTCATTATTACTTAAGTGAACGAACTCGAGTGTTATTGACAAGTGCTGCCTATGTCCATTTAAAACATGATCAATTTCAGAAGCACACTCGGAACCTTTCTCCTGTGAGCAGGAGTATTTTGCTTTCTGGCCCTGCTGAATTTTACCATCAAATGCTTGCCAAGGCTTTAGCATATCAATTCGAATCAAAATTGCTGTTGCTAGACTTTACAGACTTCTCCTTGAAGATGCAAAGCAAACATGGTGTTTTAAGAAAAGAATCTTCTCTTAAGAAGTCCATATCAGAGGCAACATTTGAACGGGTGTCAAGTTTGTTTAGTTCCTTTCCTTCTGTCTCTTCAAGTAGCAGCACGAGAGGCTCATTAATTCGTCAAAGTTGCGACACAGATAAAAAATCGAGGAATTGTGAAGGTTTGATTGAACCTCAAAAACATCGTAGGAATGCCTCTGCTACATCTGACATTGGTAGCTCTGCTCCTAGAAATCCAGGTCACACAAAATGCACAGGCAGTTGGTGTTTTGATGAGAAACTTTTTCTGCAGTCACTTTACAAGGTTTTGGTGTCTTTCTCTGAGACCAGTTCCATCATCTTATACCTCAGAGATGTTGACAAATATTTTCTGAGGTCAAAGAGATTGTATAATCTATTCAATAAAATGTTAAGCCAACTTTCAGGGTCAGTATTGATACTTGGCTCCCGGTTGGTGGGCTCTGAAGATGACGTTGGAGAAGTTGACGAAAGCCTCACTGCCTTATTCCCTTACAACATTGAAATCACACCTCCACAGGATGAGACTCTCCTTCTCACCTGGAAATCCCAGATTGAAGAAGACATGAAAATGCTTCAGTGTCGAGATAATAGAAACCACATTGCTGAAGTACTTGCAGCAAATGACATTGAGTGTGATGATCTAGGTTCAATCTGCTATTCAGATACAATGGTCCTGAGTAATTATATTGAAGAAATTGTGGTATCTGCAATATCTTATCATCTGACAAAGAATAAGGATCCTGAGTACCGAAATGGAAAGCTAATTATATCATCCGAGAGTTTGTCCCAGGGGCTGAGTTTATTCCAGGAAGGCAAAAATGGTCTAAGAGACACACTAAAAATGGAGACTAATGAATCTACTGAGGAAGCTTCTGGAGAAGAAGGTACGAAGAACGATTTAAGGTCTGACAACCAGTCACCTGAAAACAAAAATGAGAATGAGAAATCAATCCCTGTAGTGAAAAAAGATAGTGAGAAAGCAGCTCCTCCGAAAGCGGAAGTTCCTCCTGACAACGAGTTTGAGAAGCGCATAAGACCAGAGGTTATTCCTGCAAATGAGATTGGGGTGACATTTGCAGATATCGGAGCAATGGATGAAATCAAGGAATCACTTCAGGAGCTCGTAATGCTTCCACTACGAAGACCAGACCTTTTCAAAGGCGGCCTTCTGAAGCCTTGTCGCGGTATTTTGCTCTTTGGCCCTCCAGGAACTGGAAAAACAATGCTGGCAAAGGCCATTGCAAATGAAGCCGGAGCAAGTTTTATAAATGTCTCAATGTCTACCATCACTTCGAAATGGTTCGGAGAAGACGAGAAGAATGTTAGAGCTCTATTCACTCTAGCAGCAAAGGTTTCTCCAACCATAATCTTTGTTGATGAGGTTGACAGCATGCTTGGACAGAGAACAAGAGTTGGAGAGCACGAAGCTATGCGAAAGATTAAAAATGAATTCATGACACACTGGGATGGCTTATTGACCAAATCTGGTGAACAAATACTAGTTCTTGCTGCGACGAACAGGCCATTTGACCTTGATGAAGCAATTATAAGGCGTTTTGAACGCAGAATCATGATCGGTCTGCCATCGGTTGAGAACAGGGAAATGATCTTAAAGACTCTCCTGGCAAAAGAGAATGTTGAAAATCTAGACTTCAAGGAGCTTGCTGTCATGACAGAAGGATACAGTGGAAGTGATCTCAAGAATTTGTGCACCACTGCAGCTTATCGACCTGTTAGAGAGCTCATACAAAAGGAGAGATTGAAACATGTGGAGAAGAAGAAGAGAGAAGCAGAAGGCCAAAGCTCAGAAGATAAGAATAAGGATGCAGAAGAAGAGAAAGAAGAAGTTATTGCTCTTAGGCCTCTAAACATGGATGATATGAGACAGGCAAAGAATCAAGTGGCTGCAAGTTTTGCTTCAGAGGGTTCAATAATGAATGAGTTAAAGCAGTGGAATGATTTGTATGGAGAAGGAGGCTCAAGGAAGAGGCAGCAGCTGAGTTACTTCCTTTAA 2487 0.4166 MEQKHILLSALSVGVGLGVGLGLGSGQAVQKWVGGTSSSGEISAEDIEKELISQLLEGKDSNVSFDEFHYYLSERTRVLLTSAAYVHLKHDQFQKHTRNLSPVSRSILLSGPAEFYHQMLAKALAYQFESKLLLLDFTDFSLKMQSKHGVLRKESSLKKSISEATFERVSSLFSSFPSVSSSSSTRGSLIRQSCDTDKKSRNCEGLIEPQKHRRNASATSDIGSSAPRNPGHTKCTGSWCFDEKLFLQSLYKVLVSFSETSSIILYLRDVDKYFLRSKRLYNLFNKMLSQLSGSVLILGSRLVGSEDDVGEVDESLTALFPYNIEITPPQDETLLLTWKSQIEEDMKMLQCRDNRNHIAEVLAANDIECDDLGSICYSDTMVLSNYIEEIVVSAISYHLTKNKDPEYRNGKLIISSESLSQGLSLFQEGKNGLRDTLKMETNESTEEASGEEGTKNDLRSDNQSPENKNENEKSIPVVKKDSEKAAPPKAEVPPDNEFEKRIRPEVIPANEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKSGEQILVLAATNRPFDLDEAIIRRFERRIMIGLPSVENREMILKTLLAKENVENLDFKELAVMTEGYSGSDLKNLCTTAAYRPVRELIQKERLKHVEKKKREAEGQSSEDKNKDAEEEKEEVIALRPLNMDDMRQAKNQVAASFASEGSIMNELKQWNDLYGEGGSRKRQQLSYFL* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01427 828 Gene3D - 686 759 - -
Pte5g01427 828 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 827 - -
Pte5g01427 828 Coils Coil 745 770 - -
Pte5g01427 828 SMART AAA_5 550 687 IPR003593 GO:0016887
Pte5g01427 828 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 513 688 - -
Pte5g01427 828 Pfam ATPase family associated with various cellular activities (AAA) 554 684 IPR003959 GO:0005524|GO:0016887
Pte5g01427 828 ProSitePatterns AAA-protein family signature. 657 676 IPR003960 GO:0005524|GO:0016887
Pte5g01427 828 Gene3D - 513 685 IPR027417 -
Pte5g01427 828 MobiDBLite consensus disorder prediction 747 771 - -
Pte5g01427 828 MobiDBLite consensus disorder prediction 434 496 - -
Pte5g01427 828 Pfam AAA+ lid domain 706 749 IPR041569 -
Pte5g01427 828 MobiDBLite consensus disorder prediction 216 230 - -
Pte5g01427 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 754 IPR027417 -
Pte5g01427 828 MobiDBLite consensus disorder prediction 204 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01427 Pte-Chr5 36604668 36611712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01427 514 791 Calmodulin-binding Proteins AT3G56690 34.982 1.19e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01427 - - jre:109010848 1207.97