Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01402 ATGCTTCGCGATATCAGTGACATGCTCAACCCTGTTGAATACAGCTCCATCGCTAACAAGCTTGGTATTGGTTCTCATAGACTCCTACTTTTCAGGAATGGCGTCATTCCGAAAACCCCACCGATCCCAAAACTCGGTTTCCTCATAAAATGTCACCCACCAACATTGTCTGAGAAACATTGCACGACTCCGCAGAACGAGCGGTCGTTTACAGTGTCATATCTCGAAGAGACCTGTGGGTTCTCTCCGGAAACTGCGTCATCGCTTGCCGTGCGTGTCAAGTTCAAGACCTCAGAAAATGCAGATTCCGTTCGGACCTTCCTCAGAAACTACGGGTTCTCAAACGCTCAGATACGTGACATTGTTCGGCGCGTCCCAGAGATTCTTCGGTACGACCCAGTAAAGTCGATTTCGCCCAAGTTCGAGTTCCTTCAATCGTTAGGGTTCTCAAACTCCGAACTTGCTGAAGCGGTAACGTCCAGTCCATATCTATTGTGTAGAAGCTTAGAAAATCATATCATTCCTACTTTTGAAGTTATAAAAAACTTGTTTCGATCTGATGAGAAAGCGGTGCTCTGGATCAAAGAATGGCCGTGTCTCATTTCTTTTTATAATGTGAGAGGTAACATCCAAGTCCTTCTTGATAGCGGTGTACCTGATATGTATGTTTGTAAATTACTTGAGAGGAGGCCGTTGGTGTTCCTTGAAAAATCCCGTACTTTTACAGAAGGAGTGGAGAAGCTAAAGAAATTGGGGTTCAATCCTTCGCGTTCAAATTTCGGAACAGCTTTTATTGCCGTGAGTAATATGAGCAGAGAGAAATGGGATAGGAAAATTGAGATATTTACAAAGTGGGGTTGGACTGAAGATGATTTTTTTGCTGCATTCAGGAGGTGTCCAAATATAATGTTGATATCTGAAAGTAAAATCATGTCAGTCATGGATTTTTTGGTGAACCAAATGGGCTGTAGTTCTATGCTGGTCGCCCGATTACCGAAGGTGTTGGAGAAGAGTTTTGAGGAAGTGATTGTTCCTAGGTCTCGTGTTGTGCTCTATCTTTATTCCAAAGGTTTGATTAAGAAGAATTGCAGCTTGGTTACCCCACTTACCGTTGCTGAAAATGTATTCGTGCAGCATTATATTGAACGTTTCGAGGAAGAAGCTCCCCTCTTGATGAACCTATATGGAGAAAATTGA 1197 0.4311 MLRDISDMLNPVEYSSIANKLGIGSHRLLLFRNGVIPKTPPIPKLGFLIKCHPPTLSEKHCTTPQNERSFTVSYLEETCGFSPETASSLAVRVKFKTSENADSVRTFLRNYGFSNAQIRDIVRRVPEILRYDPVKSISPKFEFLQSLGFSNSELAEAVTSSPYLLCRSLENHIIPTFEVIKNLFRSDEKAVLWIKEWPCLISFYNVRGNIQVLLDSGVPDMYVCKLLERRPLVFLEKSRTFTEGVEKLKKLGFNPSRSNFGTAFIAVSNMSREKWDRKIEIFTKWGWTEDDFFAAFRRCPNIMLISESKIMSVMDFLVNQMGCSSMLVARLPKVLEKSFEEVIVPRSRVVLYLYSKGLIKKNCSLVTPLTVAENVFVQHYIERFEEEAPLLMNLYGEN* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01402 398 Gene3D Transcription termination factor 3, mitochondrial 203 387 IPR038538 -
Pte5g01402 398 Gene3D Transcription termination factor 3, mitochondrial 91 202 IPR038538 -
Pte5g01402 398 PANTHER CGI-12 PROTEIN-RELATED 66 383 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 Pfam mTERF 269 376 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 Pfam mTERF 107 254 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 FunFam Mitochondrial transcription termination factor-like 169 388 - -
Pte5g01402 398 SMART mt_12 325 359 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 SMART mt_12 46 82 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Pte5g01402 398 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01402 Pte-Chr5 36282487 36283683 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte5g01402 mTERF 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01402 K15031 - qsa:O6P43_003535 291.967