Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01399 ATGTTTCTCATGTTCTCGTCCCAGTGCTCATTCGCTCTCTTATTCGCTACCGCTGGTGCCACTGCAACTTCCGCAGCGATGATTATCCCTGAGAAGAATCGTAAGGAGATCTGCAAGTACCTCTTTCGAGAAGGAGTTTGCTACGCCAAGAAAGATTACAATTTGGCGAAACACCCTGAGATTGATGTTCCAAATCTGCAGGTTATTAAGCTTATGCAAAGCTTCAAGTCAAGGGAGTATGTCCGCGAGACTTTTGCATGGATGCACTACTACTGGTACCTGACGAACAGTGGAATCGATTTCTTGAGGACGTATCTCAATCTCCCTTCTGAAATTGTTCCTGCAACCTTGAAAAAATCAGCAAAGGCTCCTGGCAGGCCTTTTGGTGGACCTCCTGGTGATCGGCCACGTGGTCCACCTCGCTTTGAGGGTGGTTCAAGATTTGGCGACCGTGATGGATATCGTGGTGGAGGTCCTCGTGGACCCCCTGGCGATTTTGGTGGTGAGAAGGGTGGAGCTCCTGCCGACTTCCAGCCCTCATTTAGGCAAGGTCCTACTAGGCCTGCATTTGGTCGTGGTGGAGGTGGAGGTTATGGTGCACCACCAAGTTCAAGCTTCTCTTGA 624 0.5016 MFLMFSSQCSFALLFATAGATATSAAMIIPEKNRKEICKYLFREGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNSGIDFLRTYLNLPSEIVPATLKKSAKAPGRPFGGPPGDRPRGPPRFEGGSRFGDRDGYRGGGPRGPPGDFGGEKGGAPADFQPSFRQGPTRPAFGRGGGGGYGAPPSSSFS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01399 207 MobiDBLite consensus disorder prediction 140 154 - -
Pte5g01399 207 PANTHER 40S RIBOSOMAL PROTEIN S10 27 202 IPR037447 -
Pte5g01399 207 FunFam 40S ribosomal protein S10 27 130 - -
Pte5g01399 207 Gene3D - 27 130 IPR036388 -
Pte5g01399 207 Pfam Plectin/S10 domain 29 120 IPR005326 -
Pte5g01399 207 MobiDBLite consensus disorder prediction 119 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01399 Pte-Chr5 36273468 36276158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01399 27 182 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.013 3.31e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01399 K02947 - qsa:O6P43_004259 233.417