Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01396 ATGGCGGTCGGGATATCTGCCGCCACAACAACACCAAAAACCCTTTTCATGTTTCAAAATTCACAACCCCGTCAAAACCGAACCTCCACGCTCTTGTTCACTCCCTTAAGCATTCGTCACAGGATGGTAAGTAATATTAGAAAAATGACTAGCTTCACTGTCTTTGTTCTCATGGATGGCAAAAGACAAAGAAGTCCCCAGAGCGAGGAACCTACCGAGGACGCCTCTGATAATGTGAAATCTGAAATAATACCATCCAAATTGGCAGAAAAACTTGCTAGGAAGAAATCGGAGAGGTTCACTTATCTTGTTGCTGCTGTGATGTCTAGCTTTGGTATTACGTCCATGGCTGCTATGGCAGTTTATTACAGATTTTCATGGCAAATGGAGGGTGGAGCAGTTCCTTTTCTGGAAATGTTTGGTACATTTGCTCTCTCAATTGGCGCTGCTGTAGGAATGGAGTTTTGGGCTAGATGGGCACACAAAGCTCTCTGGCACGCTTCCTTGTGGCACATGCATGAGTCACATCACCGACCTAGAGAAGGTCCATTTGAGCTTAACGATGTCTTCGCCATAATCAACGCTGTTCCAGCCATAGCTCTCCTCTCATATGGCCTCTTCCACAAGGGTCTGTTCCCTGGTCTCTGCTTTGGTGCTGGACTTGGAATTACAGTGTTCGGAATGGCCTACATGTTTGTCCACGATGGTCTTGTCCACAAGAGATTTCCAGTTGGTCCCATTGCCAACGTACCTTATTTCAGAAAGGTTGCTGCTGCTCACAAGCTTCATCATTCAGAAAAGTTCAATGGTGTGCCATATGGATTGTTTCTAGGACCTAAGGAACTTGAGGAAGTTGGAGGGCTAGAAGAATTGGAAAAGGAGATTAGTAGGGGAATAAAATCATATAAAGGCTCATGA 918 0.451 MAVGISAATTTPKTLFMFQNSQPRQNRTSTLLFTPLSIRHRMVSNIRKMTSFTVFVLMDGKRQRSPQSEEPTEDASDNVKSEIIPSKLAEKLARKKSERFTYLVAAVMSSFGITSMAAMAVYYRFSWQMEGGAVPFLEMFGTFALSIGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGLFHKGLFPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHKLHHSEKFNGVPYGLFLGPKELEEVGGLEELEKEISRGIKSYKGS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01396 305 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
Pte5g01396 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 303 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01396 Pte-Chr5 36249672 36251630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01396 48 219 Chloroplast and Mitochondria Gene Families AT4G25700 70.286 2.05e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01396 K15746 - qsa:O6P43_008161 483.026