Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01395 ATGCTCAAGCCAATTCAATACAATCCCATTGTCAACAACCCCATGGTTGGTTCTCTCAAAGTTCTACTTTTTCTGAATGTTTCCATTCCCAGAACCCCCAAAACCCCAAAACTCTGTTTTCTCATAAGATGCAACCCACCAACTTTGTCTGCCAAATGTAGCACGACCCCTCAAAATGAATTGTCGTTCACAGCGTCGTACCTCGTAAAAAATTGTCGGTTCTTACCAGAAACTGCGTTGTCACTTTCCAAGCGTGTCACATTGAAGAACACTGAAAATCCTGATTCCGTTTTGGCATTCCTCAGAAACTATGGCTTCTCCAACTCTCAGATACGTTTCATTCTTCAGCACATCCCACAGATCCTTCTGGACGGCGATCCTGTATCACTTCAGGCCAATTTGGAGTTCCTTCAATCGAAAGGGATGCCGATACCGAAACTAGTTGAAATGGTAACAGCTTACCCAGTATTTTTATCCAGAAGCTTGGAAAAACATATTATCCCTTGTTTTGATGCTCTAAAGAACTTGCTTCATTCTGATAAGAGAGTGGTTTCGTGGATTAAAAGCAAGCCGTGTTTTATCTATCAAAGTAATCTGAAAGCTAACATCCAAGTGCTTCTTGATATTGGTGTGACTCATTTGAATGTTCGTAAGCTTTTTGTACTTAGGCCTTTTCTGTTACTCAAGAGGTGCAGCACTTTTAGGAAACGGGCAGAGGAGGTAAAAGATTTGGGGTTCAATCCTTCACATTCATATTTCATTGTTGCTTTCATCGCTATGTATATATTGGACAGAGCAAAGTGGGATCGGAAAGTAGAGGTTTTTAAGAAGTGGGGTTGGTCTGATGATGATTTTGTTGCTGCATTCAGGAGGCAGCCACGCATGATGATGTTATCTGAAAGTAAAATCATGTCAACCATGGATTTTCTGGTGAACCAATTGGGCTGTGATTCTTCGCTTGTTGCTAAACGACCAGTGATTTTACAAATGGATTTGGAGAAAACGCTCATTCCAAGGGCTCCTATTCTTCGCTATCTTTTCTCCAAAGGTTTGATGAGGAAGCATGCCAACTTAGTTACCTCACTTACCGTCACTGAAAAATTGTTCATGGAGAGGTATGTCGCACGTTTTAAGGAAGATGCTCCCCCTCACTTGGTCGAACTGTATAGAGGAAAATCGAAATATCTCCAATAG 1194 0.4137 MLKPIQYNPIVNNPMVGSLKVLLFLNVSIPRTPKTPKLCFLIRCNPPTLSAKCSTTPQNELSFTASYLVKNCRFLPETALSLSKRVTLKNTENPDSVLAFLRNYGFSNSQIRFILQHIPQILLDGDPVSLQANLEFLQSKGMPIPKLVEMVTAYPVFLSRSLEKHIIPCFDALKNLLHSDKRVVSWIKSKPCFIYQSNLKANIQVLLDIGVTHLNVRKLFVLRPFLLLKRCSTFRKRAEEVKDLGFNPSHSYFIVAFIAMYILDRAKWDRKVEVFKKWGWSDDDFVAAFRRQPRMMMLSESKIMSTMDFLVNQLGCDSSLVAKRPVILQMDLEKTLIPRAPILRYLFSKGLMRKHANLVTSLTVTEKLFMERYVARFKEDAPPHLVELYRGKSKYLQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01395 397 Gene3D Transcription termination factor 3, mitochondrial 161 380 IPR038538 -
Pte5g01395 397 SMART mt_12 184 212 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 148 180 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 SMART mt_12 318 354 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 PANTHER CGI-12 PROTEIN-RELATED 60 376 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 FunFam Mitochondrial transcription termination factor-like 162 381 - -
Pte5g01395 397 Pfam mTERF 198 369 IPR003690 GO:0003690|GO:0006355
Pte5g01395 397 Pfam mTERF 98 247 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01395 Pte-Chr5 36236778 36238763 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte5g01395 mTERF 4.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01395 K15031 - qsa:O6P43_021713 287.73