Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01394 ATGTTTTGTTCTCATCGCAAACCCCTGCTTTTCCTGAATGGTGTTATTCAGAGAATCACACCATCGCGGAAACTCTGGTTTGTCATGCAATGCAACCCGCCGATATTGTTAGCGAAATGCTGCACAAATCATTCTCCAAATTTACAGTCTTTTACAACCTCTTACCTCGCAGACAATTGTGGGTTCTCACCAGAAATGGCATTATCACTTTCCAAACATATCCACCTGAAGAACTCAGAAAAGCCCGATTCTGTTTTGAGCTTCTTCAGGAACTATGGTTTCTCACACTCTCAAATTCTTCGTCTTGTTCAGTTCGAACCAAAGTTGCTCCTTTCAGATCCCGTCAAATCGTTTTTGCCCAAATTTGATTTCCTTCAGTCGAAAGGGGTTTCAAGCTCGGAGGTTATTGAAATGGTAACCGCCTCTCCTGTACTTCTAACTAGAAGCTTAGAAAATCATATTATTCCTTGTTTCGATGTTCTCAGAACATTGCTTCAATCTGATGAGATAGCGATTTCTTGTATAAAAAGATGGACGAATCTTATTGCTCAACATAATTTCAGAACTAACATCCAAGTGCTTTTTGATAATGGTGTCCCTGAGTTGTATGTACGTAGGTTACTTTTGACTAGGCCTCTTTTATTTGTGATGAGTCCTAGTACTTTTAGGAATGGAGTGGAGAAGGTAAAGGAATTGGGATTCGATCCTTCGCATTCCCGTTTCCTTATAGCTTTCAAAGCAATGAATTGTATGAGCAAAGCCAAATGGGAGAAGAAAATTGAGATCTTTAAGAAGTGGGGTTGGAATGATGATGTTGTTCTGGCCGCATTCAGGAAATATCCTAATATGATGTTGATATCTGAAATTAAAATCAGTGCATTCATGGATTTTTGGGTGAACCAGTTGGGCTGGGATTCTCTGATGTTAGCAAGACGACCCATAGTTTTAGATATGAGTCTGGAGAAAAGAATAATTCCAAGGACTGCAGTTTTGCTCTTTCTTTCTTCCAAAGGTTTGATTAAGAAAGCTAGCTTAGTGACCCCCCTCGTCGATTCTGAGGACTTGTTCCGACGGAGATATGTTGAATGTTTCAAGGAAGAAGCTCCTCAGTTGATGAAGTTGTATGAAGAAAAAATTGAATATTTCAAACAAGAAGTAGTTCATACACAAAAGTGA 1176 0.3929 MFCSHRKPLLFLNGVIQRITPSRKLWFVMQCNPPILLAKCCTNHSPNLQSFTTSYLADNCGFSPEMALSLSKHIHLKNSEKPDSVLSFFRNYGFSHSQILRLVQFEPKLLLSDPVKSFLPKFDFLQSKGVSSSEVIEMVTASPVLLTRSLENHIIPCFDVLRTLLQSDEIAISCIKRWTNLIAQHNFRTNIQVLFDNGVPELYVRRLLLTRPLLFVMSPSTFRNGVEKVKELGFDPSHSRFLIAFKAMNCMSKAKWEKKIEIFKKWGWNDDVVLAAFRKYPNMMLISEIKISAFMDFWVNQLGWDSLMLARRPIVLDMSLEKRIIPRTAVLLFLSSKGLIKKASLVTPLVDSEDLFRRRYVECFKEEAPQLMKLYEEKIEYFKQEVVHTQK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01394 391 PANTHER CGI-12 PROTEIN-RELATED 49 367 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 FunFam Mitochondrial transcription termination factor-like 150 368 - -
Pte5g01394 391 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 SMART mt_12 239 269 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 Gene3D Transcription termination factor 3, mitochondrial 167 375 IPR038538 -
Pte5g01394 391 Pfam mTERF 86 297 IPR003690 GO:0003690|GO:0006355
Pte5g01394 391 Pfam mTERF 251 356 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01394 Pte-Chr5 36230580 36232409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte5g01394 mTERF 8.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01394 K15031 - qsa:O6P43_021712 351.288