Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01387 ATGTCCTCATCAAGCTTCACCGGCGGTGGAGTCTCGGATTTTTTCACCTTACCAGATGGGTTTACAAATCGATCTATGCAGCAGCCTCAAGCAGAAGCCACGGTTGCAGCGTCAATGAACAGGAACCCAAACCATATGGCTTCTCTATCCTTGTACAGACAACAACATCAACAACAGATGTTCCAGCAGCAGCAGCAACAGCAACATCTTCCTGCTTTGTTTCTAGACCCTTCTGCTCAGAACGCTCACCAAATTCAACCAACTCTAATGGGTAAACGGAATCTTTCCGAGTTTCAGACCTATCAAAACAATCCAATACTCAGCAATCTAATTCTCAGGTCCGTAAAGCCTCGGACTTTTCAACAAGGTCCACAGCTTTCACCTCTGTCACCTATGGATATTTCTATGTCACCGAAATTGCCTAATCCTGCTTCTTCAGTGTTCACCACTCCGTCGACGTCTCAGAGGTTTAACAACGTCCCGGTTCTTCCGCAGCATTTCCATTCTAATCAGGTTCATCTTTCAAATGGGTCAACGTTGTCTCTACCCATGAGTAGCAATACTATGAATACTGCTGCTTTCATAGCGAACACAAATGGTGGTCTTGGTTTGAAAAATACAGACTTGGGTCCAGTACATACCAGGGGCATGCCGGTGCCTCAGGAATCTGAGAAGAAGATGATCGATAATCGGCTCCTAGAATTGGAAAAACAGCTTCTTGAGGACGACAATGACGATGAAGGTGACGGGGTTTCTGTGGTTACCAACAGCGAGTGGTCTGATACGATACAGAATCTGATCAGTCCAGGAACTCAGAATCTGAATCAGAAGCTCCTTTCGACCTCGCCCACTTCGTCAACTACTTCTTCGTGTTCATCTACGTCTTCGGTGGCTTCTCCTACTTCCATTTGTTCAAAGCAGTCTCTAATGGAGGCTGCATCTGCAATCTCAGAAGGGAAATCGGAGACTGCTTCGGAGATCCTCTCCCGGTTGAGTCAAATTTCAAACGCAGGTGGAAATTCTGAGCAGAGGTTAGCCGATCACATGGTTTCAGCTTTGAAATCTCGGGTTAACCCGGTTGAAAACCCACCTCAAATTGCTGAGCTCTTCAGCAGAGAACACGCCGAGTCGACTCAGCTCCTATTCGACGTCTCACCGTGCTTCAAACTCGGTTTCATGACCGCCAATCTCGCAATCCTTGAAGCCACATTAGACGACACAGCCGCAGAAACCAAATTTCACGTGATCGATTTCGATATCGGACTAGGAAACCAGTATGTGAATCTCCTCCACACGCTCGCTGCTCAACAGAACGGCAAGCCGGCCACGGTGAAGATCACGGCTGTTACAGATAACGGTAGTAAAGACAAGTTACAGTCCGTCGGTGATATGCTCAGGCGATTAGCGGAACGAGTGAACTTGCACTTCGAATTCAACGTAGTTAGCCACACGCTGGTTGAGCTAAGCCGAGAGTCACTTGGTTGCGATCCTGACGAGACAATTGCTGTTAATTTCGCTTTCAAACTATACAGAATGCCAGACGAGAGTGTCTCCATTGATAACCCGAGAGACGAGCTTCTCCGGCGAGTCAAGAGTTTGGCGCCGAAAGTGGTGACACTGGTGGAGCAAGAGTTGAATACGAATACGGCACCTTTTATGGCCCGAGTCTCGGAATCATGTTCATATTACGGTGCTCTGTTTGACTCACTGGAGTCCACAGTGTCAAGAGATAACTCGGACCGATTCAAAGTTGAAGAAGGACTGAGTCGGAAACTAAGTAACTCGATTGCTTGTGAAGGTAGGGATCGATTTGAGAGATGCGAGGTGTTTGGCAAGTGGCGTGCTCGGATGGGCATGGCTGGATTCCAGTTAAGACAAATGAGTCAAAATGTCGCCGAGTTGATGCGGGTTCGACTGAACTCCGGCAACCGAGTCAATCCGGGATTTACAGTGAAGGAAGAGAACGGAGGGATTTGTTTTGGTTGGATGGGCCGGACTCTCACAGTCGCATCTGCTTGGCGTTAA 2025 0.479 MSSSSFTGGGVSDFFTLPDGFTNRSMQQPQAEATVAASMNRNPNHMASLSLYRQQHQQQMFQQQQQQQHLPALFLDPSAQNAHQIQPTLMGKRNLSEFQTYQNNPILSNLILRSVKPRTFQQGPQLSPLSPMDISMSPKLPNPASSVFTTPSTSQRFNNVPVLPQHFHSNQVHLSNGSTLSLPMSSNTMNTAAFIANTNGGLGLKNTDLGPVHTRGMPVPQESEKKMIDNRLLELEKQLLEDDNDDEGDGVSVVTNSEWSDTIQNLISPGTQNLNQKLLSTSPTSSTTSSCSSTSSVASPTSICSKQSLMEAASAISEGKSETASEILSRLSQISNAGGNSEQRLADHMVSALKSRVNPVENPPQIAELFSREHAESTQLLFDVSPCFKLGFMTANLAILEATLDDTAAETKFHVIDFDIGLGNQYVNLLHTLAAQQNGKPATVKITAVTDNGSKDKLQSVGDMLRRLAERVNLHFEFNVVSHTLVELSRESLGCDPDETIAVNFAFKLYRMPDESVSIDNPRDELLRRVKSLAPKVVTLVEQELNTNTAPFMARVSESCSYYGALFDSLESTVSRDNSDRFKVEEGLSRKLSNSIACEGRDRFERCEVFGKWRARMGMAGFQLRQMSQNVAELMRVRLNSGNRVNPGFTVKEENGGICFGWMGRTLTVASAWR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01387 674 Pfam GRAS domain family 306 674 IPR005202 -
Pte5g01387 674 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 273 662 IPR005202 -
Pte5g01387 674 MobiDBLite consensus disorder prediction 274 297 - -
Pte5g01387 674 ProSiteProfiles GRAS family profile. 296 674 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01387 Pte-Chr5 36175246 36177921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01387 63 675 GRAS Transcription Factor Family AT5G52510 48.287 1.05e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g01387 GRAS 4.8e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01387 - - qsa:O6P43_008171 742.265