Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01382 ATGAAAACAGAGGAGGGGAACAATTCCTTAGATACAATAATTAAGCAAGCAATCGGAAAAGAACCATTTCTTTCTTTCTCTAGGGCCAGTGACAGTCCTGTACAGTGGATTCAATTGCTTCACGCTTTGGACCAGCAAGATGTTCCTGGTTGGCCCTTACTCTCGCCTTTGAAGGTACAGCTTCAAAAGTGTGATAAGTGCTCTCGAGAATTTTGCTCTCCCATCAATTACAGAAGGCATTTACGTGTGCATCACAGATTGAAAAAGCTTGACAAGGATTGTATGAAAGATAGAGAGATGTTAAGAGCTTATTGGGATAAGCTCTCATTAGAAGAGGCAAAGGAAGCTGTCTCTTTGAAGAATGCAATGCTGGAGGAAGTTCCAGGGTCTTCGGTTATAAAAGCTTTGACAGCCCTTGTTCGCAAACCGGGATTCTCATCACTCCCGCAGTATTATTTGAAGGCTGGTTCCACCCTTTTGGATCTTATTCAAGCTAGACCCTCCAGGTTTCCTATATCTTCCCAGGAGTTATTCAGTATACTTGATGATGCAAGTGAAAAAACATTCTTATGTGGAGCGGCCGGTTCAATGCAAAAATACATTTTTAATGGAGAGGCGGGAAAGATTGGTCTTGAGACAAAAAATTTGATTGCATGTGCTAGCTTCTTAGTGGAGCAGAAATTGGTCAAAGAATGGCTTGCTGACAAGGATGCTGAAGCATTGAGGTTCCAGAAGATACTGGTTGAGGAAGAAGAAGAAGCTCAAAAAAGACGCACCGAGCTTTTGGAAAAGAAAAGGAGGAAAAAGCTTAGACTGAAAGAGCAGAGAGCGAAAGATAAACAGTATGCAGCAGACAATGCAGAATCTAAAGATGGTATCAGCAGTACAGAAGGATCTGTTTCACCGACAGAAGCTTGTAGCCCTTTAGCTATTCATTTCCATGAAGCGAATCCTCCAGACAATTTACTTGATCAATTCCCGTCATCGCTCAATGCATGCCAGTGCCAAAACTCCGATAAAGCGGAACATAGCGAACCTCAGTCAGGTTTCAGTTCCGAATTTGCTGAACATTCAAGCACTACTGCTAACATTGACAAACAGACAGTAGTAGAAAGGCATGTTAGGCAACGTACAAGTGTAAACCGACAACAGGTGTTGCCAAGATCACAGTGGACTGCGACCAGTGGTTATTATACAAATAACACTTTGCAAATATCCAAGTATGGAGTCACACATAAGTCTGGGCTACGAGGTCAAAGGCTTACTGCTCCTGCAATAAATGGTTATAGAGTATGGAGTCGAAAGTCAAAAACTGAAATGAATGAGACCATTTCGCAAGCCAGGTCACCAACTGAACAGAATAACAGGCCAGATCAAGTTAAAAATGGCGAAGTCCTAATAGGTTCCATATCTGTTACCCTTGGCAATTGTTGCCAACCAGAGGGTAATCCAGCAGAATCTCGAGACAAATCTATTGTAGAGAATATGCCAAGGCAGGAGAACATCCAAGAGAAACCTACAAAAACTGATTTTCTGCAGAGTGGCTCAAATCGATCAACCATTAAGCTTTGGAGGCCAGTCAGTCGTCAGGGTTTGAAAGAAACAACATCTGTAAACGATGAGAGAGAAGCTGACAAGGATTGTATTGGTGGGAAGGGAGGTGATCAAACTTTGACGGAGAATTTTAGATCAATTTACACAGATGATAATGCAAACACTCCTGTATACGACGGTCTGAATCCCAGAATTTTAGGATTCTCAAGCCACGCTGCAAGAGCCTTTCTAGAGCAAAGATGGGAAGAGGCTATCTCTTCAAACCACGTGAAGTTAGTTCTTTCACCAAACTCTGAAACTCCTGGACGATTTGAGTTAGAGAATCATGAGCAAACATCTTCATATACAAGTCGTGATGCCCGCAAGATTCTCGATAGTGCAGAGAATGGCTTGGTAAACTTAGGGGCTCTTGACGGTACATCCTCCATAGCTGATAAATCCAAGTTGGGCATGAAGCCTGACAAAGGTGTTAAATTAAAGTACATTCCCAAACAGAAGACAGCTACGTAG 2064 0.4239 MKTEEGNNSLDTIIKQAIGKEPFLSFSRASDSPVQWIQLLHALDQQDVPGWPLLSPLKVQLQKCDKCSREFCSPINYRRHLRVHHRLKKLDKDCMKDREMLRAYWDKLSLEEAKEAVSLKNAMLEEVPGSSVIKALTALVRKPGFSSLPQYYLKAGSTLLDLIQARPSRFPISSQELFSILDDASEKTFLCGAAGSMQKYIFNGEAGKIGLETKNLIACASFLVEQKLVKEWLADKDAEALRFQKILVEEEEEAQKRRTELLEKKRRKKLRLKEQRAKDKQYAADNAESKDGISSTEGSVSPTEACSPLAIHFHEANPPDNLLDQFPSSLNACQCQNSDKAEHSEPQSGFSSEFAEHSSTTANIDKQTVVERHVRQRTSVNRQQVLPRSQWTATSGYYTNNTLQISKYGVTHKSGLRGQRLTAPAINGYRVWSRKSKTEMNETISQARSPTEQNNRPDQVKNGEVLIGSISVTLGNCCQPEGNPAESRDKSIVENMPRQENIQEKPTKTDFLQSGSNRSTIKLWRPVSRQGLKETTSVNDEREADKDCIGGKGGDQTLTENFRSIYTDDNANTPVYDGLNPRILGFSSHAARAFLEQRWEEAISSNHVKLVLSPNSETPGRFELENHEQTSSYTSRDARKILDSAENGLVNLGALDGTSSIADKSKLGMKPDKGVKLKYIPKQKTAT* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01382 687 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Pte5g01382 687 MobiDBLite consensus disorder prediction 614 635 - -
Pte5g01382 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 686 - -
Pte5g01382 687 MobiDBLite consensus disorder prediction 272 301 - -
Pte5g01382 687 ProSitePatterns Zinc finger C2H2 type domain signature. 64 85 IPR013087 -
Pte5g01382 687 MobiDBLite consensus disorder prediction 532 554 - -
Pte5g01382 687 Coils Coil 247 278 - -
Pte5g01382 687 MobiDBLite consensus disorder prediction 535 550 - -
Pte5g01382 687 MobiDBLite consensus disorder prediction 337 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01382 Pte-Chr5 36119476 36126235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01382 4 684 C2H2 Transcription Factor Family AT4G25610 43.631 3.93e-155 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte5g01382 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01382 - - qsa:O6P43_004283 681.404