Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01377 ATGGCTCCAAAGCAGCCTAATTCAGGCCTTTTTGTGGGATTGAATAAGGGTCACATTGTCACCAAGAAGGAATTGCCTCCGCGCCCCTCTGATCGCAAAGGAAAAACAAGTAAGCGAGTCCACTTTGTGAGAAACCTCATCAGGGAGGTGGCGGGTTTTGCACCGTATGAGAAGAGAATTACTGAGCTCTTGAAGGTAGGTAAGGACAAGCGTGCTTTGAAGGTTGCCAAGAGAAAGCTGGGAACACACAAGAGAGCCAAGAGAAAGCGTGAGGAGATGTCCAACGTGCTTCGCAAGATGAGAGCTGGTGGTGGCGGGGAGAAAAAGAAGTGA 333 0.4955 MAPKQPNSGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGGGEKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01377 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pte5g01377 110 MobiDBLite consensus disorder prediction 79 110 - -
Pte5g01377 110 MobiDBLite consensus disorder prediction 1 38 - -
Pte5g01377 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 106 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pte5g01377 110 Gene3D 60S ribosomal protein L36 1 105 IPR038097 -
Pte5g01377 110 MobiDBLite consensus disorder prediction 87 110 - -
Pte5g01377 110 FunFam 60S ribosomal protein L36 1 106 - -
Pte5g01377 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01377 Pte-Chr5 36081225 36082942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01377 1 111 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 81.416 1.67e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01377 K02920 - mnt:21389936 213.386