Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01353 ATGAAGGATGCTTTGGGTAACCCCATCTGTAACAACTGTGGGGGCCCTGCGATTCCTGTTCAAATTTCAATGGAGGAGCACCATCTAAGAGTTGAGAATGCTCGATTGAAGGAAGAATTAAGTCGTCTATGTACTTTGTCAAACAAGTTTCTGGTCAAGCAGAATCCATTTCTGGATGATCCTCTTCGAATTACGAATGCATCTATTGGCTTGGAGCTTGGTGTAGGCAGAAATAGTACGAGTGCAGGTGTAAACAGCAGTTCTAGCTTGCCAATGCGCCTTAACTTAGGCGATGGACTTATGGACTCTTCACTTGGATTGCTGGCTATGAAGTCATCTACATTTGGATTGATGGGGAATGAAGTTCCAGTTGACAGATCTATGTTAGTAGAGCTTGCCTTGAATTCTATGGATGAGCTAGTTAAGATGGCTCAGGCTGAAGGACCTCTTTGGATCAAAGCTCTAGATGGAATGGAGGTGCTGAACCGTGAGGAGTACTTGAGAAATTTTGCTCCTTGTCTAGCCCCAAAACCCACTGGTTACGTCACTGAGGCTACTAGACAGAGCGGTTTAGTTATAATCAACAGTGTGGCTCTGGTAGAGACTTTGATGGATGCGGGCCGATGGCAAGCAATGTTTCCTGGATTGATTGCAAGTGCTGCTACACTTGATTTAGTGTCAAATGGCATGAATGGTTCTCCGAATGGTACTCTACAAGTGATGAATGCTGAGATTCAATTGCTTTCACCATTGATTCCGATTCGTCAATTGAGGTTTATTCGCTTCTGCAAGCAGCATGCAGAGGGGTTATGGGCTGTAGTTGATGTTTCCGTCGACATTGGCCCGGAAAATACCGGCAAAAACCCATACTTAAACTGTAGAAAGCTTCCTTCCGGCTGCATTGTGCAGGATATGCCCAATGGTTACTCAAAAGTCATTTGGATTGAGCATTCAGAGTATGATGACAGTCTCATCCCTCAGCTCTACCGGCCATTGCTTAGTTCTGGCATTGGGTTTGGTGCTAACAGGTGGATTGCCACTCTTCAAAGACAATGTGAATGCTTGGCAATTCTCATGCACCCTTCCATGCCTAATAATGACCATTCAGCCATAAGCCATGCTGGTAAGAGAAGCATGTTGAAGCTTGCCCAGCGTATGACTGATAGCTTCTGTTATGGGATTTGTCCATCGAGTGTGCGCAAGTGGGAGAAGCTCTCACTTGGAAATTTGGATAATGACATGAGAGTGATGGCTCGTAAGAACGTCGATGACCCCGGTGAGCCTCCTGGTTTTCTTCTCAGTGCTGCAACTTCTGTCTGGATGCCAGTTTCACGGCAGAAGCTGTTCAACTTTCTGAGAAACGAACAGCTCAGGAGCGAGTGGGACATTTTGTCAAATGGTGGTCCGATGCATGAGATGGTCCATATTGCCAAAGGCCAAGGGCAAGGCAATTGTGTCTCCCTTCTTCGTTCTAATACTGTGCATGCCAATGAGAGCTCCGTGCTGATATTGCAAGAGACATGGACAGACGCCTCATGCTCAGCAATAGTATATGCTCCCGTTGATGTAGATTCTCTAAACATCGTAATGAGTGGCGGGGATTCCGCATATGTGCCGCTTCTGCCTTCGGGATTTGCAATTCTTCCAGATGCCCGATCAGGATACAGCAATGGTGGTGTAGGTGATAATGAACATGATAGTGGCGGAAGCCTGCTTACAGTTGGGTTCCAGATATTGGTGAGTAGCGTGCCGTCATCAAATCTCACTTCTGAGTCAGTTGACACTCTGAACAATGTCATTGCCAACACCATTCAGAGGATCAAAACTGTTCTCCATGTAGAATGA 1845 0.4602 MKDALGNPICNNCGGPAIPVQISMEEHHLRVENARLKEELSRLCTLSNKFLVKQNPFLDDPLRITNASIGLELGVGRNSTSAGVNSSSSLPMRLNLGDGLMDSSLGLLAMKSSTFGLMGNEVPVDRSMLVELALNSMDELVKMAQAEGPLWIKALDGMEVLNREEYLRNFAPCLAPKPTGYVTEATRQSGLVIINSVALVETLMDAGRWQAMFPGLIASAATLDLVSNGMNGSPNGTLQVMNAEIQLLSPLIPIRQLRFIRFCKQHAEGLWAVVDVSVDIGPENTGKNPYLNCRKLPSGCIVQDMPNGYSKVIWIEHSEYDDSLIPQLYRPLLSSGIGFGANRWIATLQRQCECLAILMHPSMPNNDHSAISHAGKRSMLKLAQRMTDSFCYGICPSSVRKWEKLSLGNLDNDMRVMARKNVDDPGEPPGFLLSAATSVWMPVSRQKLFNFLRNEQLRSEWDILSNGGPMHEMVHIAKGQGQGNCVSLLRSNTVHANESSVLILQETWTDASCSAIVYAPVDVDSLNIVMSGGDSAYVPLLPSGFAILPDARSGYSNGGVGDNEHDSGGSLLTVGFQILVSSVPSSNLTSESVDTLNNVIANTIQRIKTVLHVE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01353 614 SMART START_1 131 354 IPR002913 GO:0008289
Pte5g01353 614 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 612 IPR042160 -
Pte5g01353 614 Pfam START domain 132 354 IPR002913 GO:0008289
Pte5g01353 614 CDD START_ArGLABRA2_like 126 353 - -
Pte5g01353 614 ProSiteProfiles START domain profile. 122 357 IPR002913 GO:0008289
Pte5g01353 614 SUPERFAMILY Bet v1-like 382 608 - -
Pte5g01353 614 SUPERFAMILY Bet v1-like 123 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01353 Pte-Chr5 35681480 35687038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01353 1 614 Homeobox Transcription Factor Family AT3G61150 53.208 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01353 K09338 - gmx:100794400 838.18