Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01350 ATGGGCTTATTCCAGCGGCTTTTCGGAACCAAGAAACAATCAGTAAACTCAGATCGATCGGGTTCCAAAACGCAAAAGAGGAGGTGGAGTTTCGTGAAGTCCAGCAAGGATAAGTCTCAGTTGACAACACCGTACTCCTCTCGGTTCAATGGGTTGGACAACCCCTCTAGTTTATCAGGTGTGATTGGTGGCACATTGGATGCTAACAATCACGCCATAGCCGTGGCTGCAGCCACTGCAGCGGTGGCAGAGGCGGCACTGGCAGCTGCACATGCCGCGGCTGAGGTGGTCAGGCTGACAAGTGGTGCCGGTACACGTGTTCCGAGGTGTGCCTACACTGCGCACTTTAGCACTAGCCAGAGAGTGTTGGTTGAAAACGTTGCAGCTGTTAAGATACAGTCGGCATTCCGAGGTTACTTGGCAAGAAGGGCCTTAAGGGCACTCAAGGCATTGGTGAAGTTGCAAGCATTAGTCAGGGGACATATAGTGCGGAAGAAAACTGCAGATATGCTGAGGCGGATGCAAACTCTGGTGAAATTGCAATCACAGGCACGCGCAAATCGAATAAGCACGGCAGAGACTTTGCATTCTAGCAAACCTTCCCTCTCAAATTTTCCTATCCCTGTAAGGAATGATGATTGGGAGCATCCCTACAATACCTATGATAACAAATTTGAGAGGTCCTCTGTATTGAAGAGGTGCAGCTCAAATTCAAATTTCAGGGAAATTGATGCTGCAAGAACGCAATTGGATACACGGTGGTTAGACCTTTGGATGGAAGAACATTTATGGACTCAGCGTGGAGATACTTCTTTGAAAACAGAAGATGATAAAATTCTTGAAGTGGATACTTGGAAACCACATCCGAACTCTGTTCCAAGCAATGACTCCTTTAGTTCATCTCAACCTAGACAGGCTTCTAATTATATATGCGCGGGATATGACTCTCCATCAAAACCTTCAAGGAAACCAATAAATCCAAGTCTATTTTCAATGGAAGCTTCATCGCTAAGCTATCTAAATTTTCCCATACTGAAAGATGAGGCAGTTTCACGGACAGCAGAGAACAGTCCCGCATTTTCGTCCTTGTCTAGAACTGGAAGTGGTGCAAGGAGAAGTCCCTTCACACCGACAAGAAGTGAGTACTCCTGGGGTTTCTTTAATGGCTATTCTGGTCATCCCAACTACATGGCAAACACAGAATCCTCTAGGGCCAAGGCTAGGTCACTTAGTGCTCCTAGACAAAGATTTGAGTTTGAGAGGTCTGGTTCGACATCAAAGTCTATACAGGGGTCCTTGGATGCTGGAGATAGTTTAGACATGGATGCTGACTTCAGAACCAAAGCTTATCAAACATCTATTCGCTTTAACAGATTGGGGAGTACTGTTATGAGGTGA 1398 0.4621 MGLFQRLFGTKKQSVNSDRSGSKTQKRRWSFVKSSKDKSQLTTPYSSRFNGLDNPSSLSGVIGGTLDANNHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGAGTRVPRCAYTAHFSTSQRVLVENVAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVKLQSQARANRISTAETLHSSKPSLSNFPIPVRNDDWEHPYNTYDNKFERSSVLKRCSSNSNFREIDAARTQLDTRWLDLWMEEHLWTQRGDTSLKTEDDKILEVDTWKPHPNSVPSNDSFSSSQPRQASNYICAGYDSPSKPSRKPINPSLFSMEASSLSYLNFPILKDEAVSRTAENSPAFSSLSRTGSGARRSPFTPTRSEYSWGFFNGYSGHPNYMANTESSRAKARSLSAPRQRFEFERSGSTSKSIQGSLDAGDSLDMDADFRTKAYQTSIRFNRLGSTVMR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01350 465 MobiDBLite consensus disorder prediction 404 433 - -
Pte5g01350 465 MobiDBLite consensus disorder prediction 355 374 - -
Pte5g01350 465 MobiDBLite consensus disorder prediction 288 303 - -
Pte5g01350 465 Gene3D - 124 177 - -
Pte5g01350 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 170 IPR027417 -
Pte5g01350 465 MobiDBLite consensus disorder prediction 418 433 - -
Pte5g01350 465 PANTHER IQ-DOMAIN 5-RELATED 21 428 - -
Pte5g01350 465 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Pte5g01350 465 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Pte5g01350 465 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Pte5g01350 465 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Pte5g01350 465 SMART iq_5 124 146 IPR000048 GO:0005515
Pte5g01350 465 SMART iq_5 147 168 IPR000048 GO:0005515
Pte5g01350 465 MobiDBLite consensus disorder prediction 284 303 - -
Pte5g01350 465 Pfam Protein of unknown function (DUF4005) 357 444 IPR025064 -
Pte5g01350 465 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01350 Pte-Chr5 35657280 35660787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01350 1 431 IQD Protein Family AT5G62070 44.671 3.54e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01350 - - qsa:O6P43_008253 432.95