Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01341 ATGCGAAAGAGGAGGTGGAGTTTCGTGAAGTCCAGCAAGGATAAGTCTCAGTTGACAACACCGTACTCCTCTCGGTTCAATGGGTTGGACAACCCCTCTAGTTTATCAGGTGTGATTGGTGGCACATTGGATGCTAACAATCACGCCATAGCCGTGGCTGCAGCCACTGCAGCGGTGGCAGAGGCGGCACTGGCAGCTGCACATGCCGCGGCTGAGGTGGTCAGGCTGACAAGTGGTGCCGGTACACGTGTTCCGAGGTGTGCCTACACTGCGCACTTTAGCACTAGCCAGAGAGTGTTGGTTGAAAACGTTGCAGCTGTTAAGATACAGTCGGCATTCCGAGGTTACTTGGCAAGAAGGGCCTTAAGGGCACTCAAGGCATTGGTGAAGTTGCAAGCATTAGTCAGGGGACATATAGTGCGGAAGAAAACTGCAGATATGCTGAGGCGGATGCAAACTCTGGTGAAATTGCAATCACAGGCACGCGCAAATCGAATAAGCACGGCAGAGACTTTGCATTCTAGCAAACCTTCCCTCTCAAATTTTCCTATCCCTGTAAGGAATGATGATTGGGAGCATCCCTACAATACCTATGATAACAAATTTGAGAGGTCCTCTGTATTGAAGAGGTGCAGCTCAAATTCAAATTTCAGGGAAATTGATGCTGCAAGAACGCAATTGGATACACGGTGGTTAGACCTTTGGATGGAAGAACATTTATGGACTCAGCGTGGAGATACTTCTTTGAAAACAGAAGATGATAAAATTCTTGAAGTGGATACTTGGAAACCACATCCGAACTCTGTTCCAAGCAATGACTCCTTTAGTTCATCTCAACCTAGACAGGCTTCTAATTATATATGCGCGGGATATGACTCTCCATCAAAACCTTCAAGGAAACCAATAAATCCAAGTCTATTTTCAATGGAAGCTTCATCGCTAAGCTATCTAAATTTTCCCATACTGAAAGATGAGGCAGTTTCACGGACAGCAGAGAACAGTCCCGCATTTTCGTCCTTGTCTAGAACTGGAAGTGGTGCAAGGAGAAGTCCCTTCACACCGACAAGAAGTGAGTACTCCTGGGGTTTCTTTAATGGCTATTCTGGTCATCCCAACTACATGGCAAACACAGAATCCTCTAGGGCCAAGGCTAGGTCACTTAGTGCTCCTAGACAAAGATTTGAGTTTGAGAGGTCTGGTTCGACATCAAAGTCTATACAGGGGTCCTTGGATGCTGGAGATAGTTTAGACATGGATGCTGACTTCAGAACCAAAGCTTATCAAACATCTATTCACTTTAACAGATTGGGGAGTACTGTTATGAGGTGA 1329 0.462 MRKRRWSFVKSSKDKSQLTTPYSSRFNGLDNPSSLSGVIGGTLDANNHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGAGTRVPRCAYTAHFSTSQRVLVENVAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVKLQSQARANRISTAETLHSSKPSLSNFPIPVRNDDWEHPYNTYDNKFERSSVLKRCSSNSNFREIDAARTQLDTRWLDLWMEEHLWTQRGDTSLKTEDDKILEVDTWKPHPNSVPSNDSFSSSQPRQASNYICAGYDSPSKPSRKPINPSLFSMEASSLSYLNFPILKDEAVSRTAENSPAFSSLSRTGSGARRSPFTPTRSEYSWGFFNGYSGHPNYMANTESSRAKARSLSAPRQRFEFERSGSTSKSIQGSLDAGDSLDMDADFRTKAYQTSIHFNRLGSTVMR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01341 442 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Pte5g01341 442 PANTHER IQ-DOMAIN 5-RELATED 3 405 - -
Pte5g01341 442 MobiDBLite consensus disorder prediction 381 410 - -
Pte5g01341 442 MobiDBLite consensus disorder prediction 261 280 - -
Pte5g01341 442 Gene3D - 101 155 - -
Pte5g01341 442 MobiDBLite consensus disorder prediction 395 410 - -
Pte5g01341 442 MobiDBLite consensus disorder prediction 331 351 - -
Pte5g01341 442 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Pte5g01341 442 Pfam IQ calmodulin-binding motif 126 143 IPR000048 GO:0005515
Pte5g01341 442 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Pte5g01341 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 147 IPR027417 -
Pte5g01341 442 MobiDBLite consensus disorder prediction 265 280 - -
Pte5g01341 442 Pfam Protein of unknown function (DUF4005) 334 420 IPR025064 -
Pte5g01341 442 SMART iq_5 124 145 IPR000048 GO:0005515
Pte5g01341 442 SMART iq_5 101 123 IPR000048 GO:0005515
Pte5g01341 442 MobiDBLite consensus disorder prediction 330 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01341 Pte-Chr5 35541703 35545171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01341 3 408 IQD Protein Family AT5G62070 44.471 1.13e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01341 - - qsa:O6P43_008253 418.313