Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01337 ATGGGTCCATCCCGTGTGACTGGAGGGTTTAGTCAATCTTCTGCAAGTTCTGGAATATTCTTTCAGGGGGATGTGCAGTCTCAGACTTTGGGCAACTCTCACTTGAACTCGTCTTTTGGAAACTCATCTAATTCTGTACCTTTAATTTCGCAATGGAATTTGGGTACAGCTTCTGGGGACGTGAACAATGCTATGTTAAATTGTGTTGCAAACTCTGCACCAAGTGTTGGGGCAAGCTCCTTGGTGACTGATGCTAATTCAGCAGTTTCTGGAGGTCCTCATTTGCAGAGAAGTACAAGTTTTAACACTGACTCTTACATGCGTTTACCAGCTTCACCCATGTCATTCTCATCAAACAATATCAGCATCTCAGGCTCCTCCGTGATAGATGGTTCTTCTGTTGGACAGCAGAACTCCCGTCAGGATCCCAGCGGGCAACATGTGCAACAGCAGATGCAAGGAACTTCAAGTGCTACGTCTTTACCTAAGTCACAAACTATTCATTCCCAAATTCCCATGATCGCAAGGACACCTGGATCTTTGTTACAGGATCCAAGTAATTTGTTACATCTGCAGAAGAAACCTAGGCTTGATATGAAACATGAGGATATCTTAAACCAGCAGGTAATGCAGCAGCTGCTTCAGAGACAGGATCCCTCACAATTTCAAGGTCGTAACCCGCAGTTGCAAGCTTTGCTTCAACAGCAAAGATTGAGGCAGCAACAGCAACAGCAACATATTCTGCAGTCTATGCCACAGTTACAGAGAGCCCAATTGCAGCAACAGCAACAGCAACATATTCAGATGCAAATGAGACAGCAGCTTCAGCAACCAGCAATACAGCCTTTATCTGCAGTGAAGCGGCCATATGATGGTGGGGTATGTGCCCGCAGGTTGATGCAATACCTATATCATCAGCACCAGCGACCTCAAGACAACAGCATTGCATACTGGAGGAAATTTGTTGCAGAGTATTATTCACCTCGGGCAAAGAAAAGATGGTGCTTGTCATTATATGATAATGTTGGTCATCATGCATTTGGTGTTTTTCCCCAAGCAGCGATGAATGGATGGCAATGTGACATATGTGGCTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTTCCCAGACTTAGTGAGATCAAATTTGGCAGTGGAGTTATTGATGAGCTTTTGTTTGTGGACTTGCCACATGAATGTAGATTTCCTTCTGGAATTATGATGTTAGAATATGGAAAGGCGGTGCAAGAAAGTGTATATGAGCAACTACGAGTGGTTCGGGAGGGTCAGCTTCGTATTATCTTCACACAGGATTTAAAGATATTATCTTGGGAATTCTGCGCAAGGCGTCACGAAGAACTGCTTCCCCGTAGGTTGGTTGCACCACAGGTGAATCAATTAGTACTGGTAGCACAAAAATGCCAGAATACAATTGCTGAGAGTGGACCCGATGGCGTATCACAACAGGATTTGCAGACAAATAGCAATATGGTACTGACAGCTGGGCGTCAGCTTGCCAAGAGTTTGGAGTTACAGTCATTGAATGACCTAGGTTTCTCAAAACGATATGTGAGGTGCTTGCAGATCTCTGAGGTGGTCAACAGCATGAAAGATCTCATTGATTTTTGCCGTGACCACAAAGTTGGACCCATTGATGGACTTAAGAGTTATCCTCGGCATGCAGCATCAAAGCTTCAGATGCAAAAGATGCAGGAGTTTGAACAGTTAGCTAGTGCACAGGGCCTACCTACTGATAGAAATGCCATGGACAAGATGGTAGCAATGCATTCTAATCAAATGAGCAGTAACCACAACATTGTCAATCGTGGTTCGTTAAGTGGTTCAGCTCAGGCTGCTTTGGCCTTGTCTAACCTCCAAAACATTCTCTCGAGACAAAACTCAATAAATTCAAATAACAGCTCCCTCCAACAAGAAGCATCGTCTTCCTTCAACAATGGAAACCAGATAACATCCTCCACCATCCGAGGAGCTGATACTTCCAATCCAGGATCCGTGCAGGGCGTGCCTGGCAATGGCCTCTCCAGTCATCATCTGGGGTCTCAGTATCACCAGCAACTGCAACAGCTTCAGCAGCGCTCATTAGGTGCTAACAGTTTGCTTCAGCAAAATCCCTCCCAGGGAAATCAGGCTTTACAACACCAGATGATCCAGAAACTCCTGCAGGAGATGTCGAATAACAATGGGGGAGGAGGTCAGCCACAGTCTCTTGCTGGGCCTAATGTTAATATGAATATGGCAAAGAGTGTGATAGGCGTTGGAGGATACACTCCGACACTGACCACGTCTACCACCAATATCTCTGGAAGTAAAGGACCTGCCCCTTGCCGGAGTAACAGTTTCAAAGCTGCTTCAAACAGTGACTCGTCTGCAGCAGCTGGTCCCAGCAATGGATTTAATAATCAAAGAGCCCCGGATGTGTATCAGAATCTGCATCTGCAAGATGACGTGATTCAGGACATTGCTCGTGAATTCACAGATGACGGGTTCTTCAGTGAATTAGATGACAACATGGGCTTTGGGTGGAAGGCGTGA 2562 0.4547 MGPSRVTGGFSQSSASSGIFFQGDVQSQTLGNSHLNSSFGNSSNSVPLISQWNLGTASGDVNNAMLNCVANSAPSVGASSLVTDANSAVSGGPHLQRSTSFNTDSYMRLPASPMSFSSNNISISGSSVIDGSSVGQQNSRQDPSGQHVQQQMQGTSSATSLPKSQTIHSQIPMIARTPGSLLQDPSNLLHLQKKPRLDMKHEDILNQQVMQQLLQRQDPSQFQGRNPQLQALLQQQRLRQQQQQQHILQSMPQLQRAQLQQQQQQHIQMQMRQQLQQPAIQPLSAVKRPYDGGVCARRLMQYLYHQHQRPQDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAFGVFPQAAMNGWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFVDLPHECRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVLVAQKCQNTIAESGPDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRDHKVGPIDGLKSYPRHAASKLQMQKMQEFEQLASAQGLPTDRNAMDKMVAMHSNQMSSNHNIVNRGSLSGSAQAALALSNLQNILSRQNSINSNNSSLQQEASSSFNNGNQITSSTIRGADTSNPGSVQGVPGNGLSSHHLGSQYHQQLQQLQQRSLGANSLLQQNPSQGNQALQHQMIQKLLQEMSNNNGGGGQPQSLAGPNVNMNMAKSVIGVGGYTPTLTTSTTNISGSKGPAPCRSNSFKAASNSDSSAAAGPSNGFNNQRAPDVYQNLHLQDDVIQDIAREFTDDGFFSELDDNMGFGWKA* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01337 853 MobiDBLite consensus disorder prediction 773 812 - -
Pte5g01337 853 Pfam LIM-domain binding protein 298 558 IPR029005 -
Pte5g01337 853 MobiDBLite consensus disorder prediction 127 166 - -
Pte5g01337 853 MobiDBLite consensus disorder prediction 641 698 - -
Pte5g01337 853 PANTHER LIM DOMAIN-BINDING PROTEIN 56 840 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01337 Pte-Chr5 35503811 35512091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01337 277 565 C2H2 Transcription Factor Family AT1G43850 57.093 9.08e-109 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01337 - - qsa:O6P43_008259 1075.85