Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01329 ATGCAGGTAGTTTCATATTGTCATGGAAATGGCATCGTTCACAGAGATCTAAAGCCAGAGAATATTCTCTTATCGACAAGGTCATCCTCCTCTCCCATTAAGTTGGCTGATTTTGGTCTTGCAACCTACATCCAGCCTGGACAGTGTTTGCATGGGTTGGTTGGGAGTCCATTTTATATAGCTCCAGAAGTACTTGCAGGTGCATATAACGAGGCTGCTGATGTGTGGAGCGCAGGTGTTATTCTCTACATTCTATTGAGTGGAATACCTCCTTTCCGGGGAAGACTAATAAATCACGGATATTTGATGCTGTTAGAGCTTTTGATTTAA 330 0.4273 MQVVSYCHGNGIVHRDLKPENILLSTRSSSSPIKLADFGLATYIQPGQCLHGLVGSPFYIAPEVLAGAYNEAADVWSAGVILYILLSGIPPFRGRLINHGYLMLLELLI* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01329 109 Pfam Protein kinase domain 2 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01329 109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 12 24 IPR008271 GO:0004672|GO:0006468
Pte5g01329 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01329 109 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 92 - -
Pte5g01329 109 SMART serkin_6 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01329 109 SUPERFAMILY Protein kinase-like (PK-like) 4 107 IPR011009 -
Pte5g01329 109 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01329 Pte-Chr5 35379952 35380390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01329 1 92 EF-hand Containing Proteins AT3G57530 54.348 1.65e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte5g01329 Pkinase 7.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01329 - - gmx:100776088 177.563