Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01321 ATGCATATGGTGGAGAAAGAGATCTTTGGTTCTGGGCTTGCCCTTAACGGTGATGAAGCCCCTCAGAGCTACCATGTGGCTCAAAGGAGCGAAAACACTGTCCTTGGTGCGCTCACAACGCCGGCTACGCCATCAGTAACTTCCGATGCGCCAGCAGTGGTACCACCTACTTCGGCACCGACTGCTGCACCTGCTGCAGCAGTAGCAGCAGCAGTAGCGACACCTGGTACAATAGAGAAGAAGAAGAAGAGAGGAAGGCCTAGGAAGTATGCTCCTGATGGTTCTATGGCTTTAGCATTATCTCCGATCCCGATTTCTTCATCGATTCCACTGAGTGGTGAGTTCTCAGCTTGGAAACGCGGTAGGGGTCGGCCCATGGAGCCAATAAAAAAGACGTTTAAATATGAGTTTGAAAGTCCAGGTGAGAGAATAGCATACTCAGTTGGTGCTAATTTCACTCCCCATGTGATTAATGTCAATTCTGGAGAGGATGTTACCATGAAAATTATGTCATTCCCTCAACAAGGATCTCGTGCTATATGCATTCTTTCTGCAAATGGCACAATATCGAATGTTACACTTCGTCAGCCCACTACTTCTGGAGGCACTCTAACATATGAGGGACGATTTGAGATACTCTCCTTGTCTGGATCTTTTATGCCTACTGAGAATGGAATAACAAAGAGCAGATCTGGAGGGATGAGTGTCTCTTTGGCAGGTCCTGATGGTCGAGTGGTTGGGGGAGGACTTGCTGGTCTATTGGTAGCTGCTGGTCCTGTGCAGGTTGTAGTTGCCAGTTTCCTACCAGGTCACCACAAAGAACAGAAACCCAAGAAGCAGAGAATGGAGACACTATCAGTGATGACACCTCCTATTATTACTTCCATGTCTGCTGAAGAAGCGAAAGGTGCCTTTGGTGGAATAAAACCCATTATAACTCCTACTGCATTCCATGCAGATAATCTAGCTCCTTTCAACAATGTTCAGATATTTAGGACTTCTTCTGCTGACACCAAGACGTCTTTGCCTGAAGACGAATATAAAGATCACAGCCAATCAAACTGCGAGGTGTCTTACTGA 1080 0.4667 MHMVEKEIFGSGLALNGDEAPQSYHVAQRSENTVLGALTTPATPSVTSDAPAVVPPTSAPTAAPAAAVAAAVATPGTIEKKKKRGRPRKYAPDGSMALALSPIPISSSIPLSGEFSAWKRGRGRPMEPIKKTFKYEFESPGERIAYSVGANFTPHVINVNSGEDVTMKIMSFPQQGSRAICILSANGTISNVTLRQPTTSGGTLTYEGRFEILSLSGSFMPTENGITKSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVASFLPGHHKEQKPKKQRMETLSVMTPPIITSMSAEEAKGAFGGIKPIITPTAFHADNLAPFNNVQIFRTSSADTKTSLPEDEYKDHSQSNCEVSY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01321 359 CDD DUF296 153 267 IPR005175 -
Pte5g01321 359 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 319 IPR039605 GO:0003680
Pte5g01321 359 Gene3D - 154 290 - -
Pte5g01321 359 ProSiteProfiles PPC domain profile profile. 149 288 IPR005175 -
Pte5g01321 359 MobiDBLite consensus disorder prediction 337 359 - -
Pte5g01321 359 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 267 IPR005175 -
Pte5g01321 359 FunFam AT-hook motif nuclear-localized protein 1-like 154 284 - -
Pte5g01321 359 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01321 Pte-Chr5 35286969 35291402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01321 12 358 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 48.333 1.09e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01321 - - qsa:O6P43_005480 416.772