Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01318 ATGTCAGCTCTCATGGATTTGAAAACCTCTTTAGACCCAGAAGATCAGTTTCTTTCTTCATGGAATAACAATGGTGACCCGTGTGGGGGTTTGTTTGCTGGAATAGCTTGCAATAACAAGGGTCAAGTAGCCAACATTTCGTTGCAGGGAAGGGGTCTCTCAGGAAAGCTCTCACCAGCCATTGCTGGGCTTAAGCACTTGACAGGGCTTTACTTGCACTTCAACTCCTTGCATGGAGAGATACCCAGAGAACTTTCAAATTTGACAGAGTTGAGTGATCTGTATTTGAATGTAAATCGTCTATCTGGGGATATCCCTCCTGAAATTGGCATTATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAACCAGCTCACTGGAAGCATACCCAATCAGTTGGGTTTTCTGAAGAAGCTCGCAGTCCTGGCTCTACAATCAAACCAATTAACAGGTGCTATACCAGCTAAATTGGGTGATTTAGAGATGTTAAGGAGGTTAGATTTGAGTTCCAACCACCTATTAGGTTCTATTCCTTCAAGACTTGCTGATGCACCTCAGCTTGAAGTGCTAGATGTCCGTAATAATACTCTTTCTGGGGATGTGCCTCCTGCTTTTGGACCAGGTACCATGTCAGCCAAAAACATTCCAGAAACTGCAAATATACTGATTCCGTGCAATGGAACTCGATGCTCAACAAGTTCATCGGCATCCAAACATGCTGCAGCTGTTACTGGCTTGATTGTGGTCATAATTGCACTCTCAGCAATTGGTATTCTAACATTCACGAAATATCGCTGTCAAAAGCAAAAGCTTGGGAACTCAATCGATGTCGCTGATAAGCGTATAAGTACTGATCAAGCCGAGGGAGTTTACAGGAAGAATGGCTCACCTCTCATCAATCTTGAGTATCCCAATGGATGGGATCCATTGGCTGACGGGCGAAATTTTATTGGCGATACCAAAAATCTCTTTCAGAATCATATGTTCAATTTAGAAGAGGTGGAAACTGCTACGCAATATTTTTCCGAGTTAAATTTTTTGGGAAAGGGCAGTTTTTCTGCAACATATAAAGGGATATTAAGAGATGGATCCGTTGTTTCCATAAAGAGCATCAGTAAAACATGTTGCAGATCAGATGAAGCTGAGTTTCTGAAGGGATTGAACATCTTGACTTCCTTAAGGCATGAGAATCTAGTAAAAATGAGAGGATTCTGTTGTTCTAGAGGACGCGGTGAATGCTTCTTAATATATGATTTTGTGCCTAATGGAAATCTCTTGCGGTACCTTGATGTAAAGGAAGGTGATGGCCAAGTCCTTGAATGGTCTATCAGAGTTTCTATTGTGAAAGGAATTGCCAAAGGTATTGCATATTTGCATGGACACAGAGTCAACAAACCTGCAATTGTTCACCAAAATTTATCAGCTGAGTCTGTGTTCATCGATCAGCGGTTCAACCCTCTTATTTCAGATTCTGGCTTGCACAAGCTCCTCACAAATGATATTGTCTTTTCTTCTCTAAAATCCAGTGCTGCGATGGGATATCTAGCACCTGAGTACACAACTACTGGTCGATTCACTGAAAAAAGTGATGTTTATGCATTTGGGGTCATTCTTTTCCAAATCCTATCAGGGAAGAGAAATGTTGCTAGCTCAATACGCTTAGCTGCAGAATCATTTCAGTTTCAAGGTTTTATTGATCCCAATCTCCATGGAAGATTCTTTGAATATGAAGCAGCAAAGCTTGCTAGAATGGCTTTGGTTTGCACTCATGAGTCTCCATTTGATAGGCCATCCATGGAAGCCATTGTTCAAGAACTGGCCACTTGCAGTAGCTGTCTTTGA 1842 0.4164 MSALMDLKTSLDPEDQFLSSWNNNGDPCGGLFAGIACNNKGQVANISLQGRGLSGKLSPAIAGLKHLTGLYLHFNSLHGEIPRELSNLTELSDLYLNVNRLSGDIPPEIGIMENLQVLQLCYNQLTGSIPNQLGFLKKLAVLALQSNQLTGAIPAKLGDLEMLRRLDLSSNHLLGSIPSRLADAPQLEVLDVRNNTLSGDVPPAFGPGTMSAKNIPETANILIPCNGTRCSTSSSASKHAAAVTGLIVVIIALSAIGILTFTKYRCQKQKLGNSIDVADKRISTDQAEGVYRKNGSPLINLEYPNGWDPLADGRNFIGDTKNLFQNHMFNLEEVETATQYFSELNFLGKGSFSATYKGILRDGSVVSIKSISKTCCRSDEAEFLKGLNILTSLRHENLVKMRGFCCSRGRGECFLIYDFVPNGNLLRYLDVKEGDGQVLEWSIRVSIVKGIAKGIAYLHGHRVNKPAIVHQNLSAESVFIDQRFNPLISDSGLHKLLTNDIVFSSLKSSAAMGYLAPEYTTTGRFTEKSDVYAFGVILFQILSGKRNVASSIRLAAESFQFQGFIDPNLHGRFFEYEAAKLARMALVCTHESPFDRPSMEAIVQELATCSSCL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01318 613 SMART LRR_typ_2 64 88 IPR003591 -
Pte5g01318 613 SMART LRR_typ_2 112 136 IPR003591 -
Pte5g01318 613 SMART LRR_typ_2 160 184 IPR003591 -
Pte5g01318 613 FunFam Protein NSP-INTERACTING KINASE 2 1 146 - -
Pte5g01318 613 PANTHER LEUCINE RICH REPEAT KINASE 2 18 134 - -
Pte5g01318 613 Pfam Protein tyrosine and serine/threonine kinase 345 606 IPR001245 GO:0004672|GO:0006468
Pte5g01318 613 CDD STKc_IRAK 347 606 - -
Pte5g01318 613 Gene3D Ribonuclease Inhibitor 148 219 IPR032675 -
Pte5g01318 613 Gene3D Ribonuclease Inhibitor 1 147 IPR032675 -
Pte5g01318 613 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Pte5g01318 613 FunFam Protein NSP-INTERACTING KINASE 2 420 610 - -
Pte5g01318 613 SUPERFAMILY Protein kinase-like (PK-like) 324 607 IPR011009 -
Pte5g01318 613 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01318 613 Gene3D Transferase(Phosphotransferase) domain 1 421 612 - -
Pte5g01318 613 Pfam Leucine rich repeat N-terminal domain 2 38 IPR013210 -
Pte5g01318 613 SUPERFAMILY L domain-like 4 206 - -
Pte5g01318 613 Gene3D Phosphorylase Kinase; domain 1 317 419 - -
Pte5g01318 613 FunFam Protein NSP-INTERACTING KINASE 2 312 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01318 Pte-Chr5 35262319 35265244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01318 1 454 Miscellaneous Gene Families AT4G22730 51.683 8.49e-169 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pte5g01318 PK_Tyr_Ser-Thr 9.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01318 - - cit:102620222 929.858