Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01316 ATGGCTGCCTCCCTTGGTATGTCTGAAATGCTTGGAACCCCTCTTAACTTCAGGGGTACAACTAGGTCAGCTCTATCATCTTCTGGCTCTGCTACCTTCAAGACTGTAGCACTTTTCTCCAAGAAGAAGCCCGCAGCACCTGCACCAAAATCAAAGCTAGCCAGCGCGTCACCAATCGACGATGAACTCGCCAAGTGGTATGGTCCTGAAAGAAAAATCTACTTGCCAACTGGTCTCTTGGACCGATCTGAAATCCCAGAGTACTTGACTGGAGAAGTACCTGGAGATTATGGCTACGATCCATTTGGACTCAGCAAGAAGCCTGAGGACTTCAGCAAATACCAAGCATATGAATTGATTCACGCACGTTGGGCCATGCTGGGTGCAGCAGGGTTCATCATCCCAGAAGCCTTCAACAAATTTGGTGCCGACTGTGGTCCTGAGGCTGTCTGGTTCAAGACAGGAGCATTGCTTCTTGATGGAAATACATTGAATTACTTTGGGAAGAACATCCCCATCAACCTTATAGTTGCTGTCATTGCTGAGGTAGTTCTTGTTGGTGGTGCAGAATACTACAGAATCATCAATGGCCTGGATTTGGAGGACAAGCTTCATCCAGGCGGTCCATTTGACCCATTGGGACTTGCAAAGGATCCAGACCAGGCTGCATTGCTAAAAGTGAAAGAGATTAAGAACGGTAGACTTGCCATGTTTGCCATGCTTGGTTTCTTCATCCAAGCTTATGTCACAGGAGAAGGTCCAGTTGAAAACCTAGCAAAACATCTCAGCGATCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGATCAGCTGAAAGAGCTCCTACTCTGTGA 855 0.4713 MAASLGMSEMLGTPLNFRGTTRSALSSSGSATFKTVALFSKKKPAAPAPKSKLASASPIDDELAKWYGPERKIYLPTGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01316 284 Gene3D Chlorophyll a/b binding protein domain 73 284 - -
Pte5g01316 284 FunFam Chlorophyll a-b binding protein, chloroplastic 73 284 - -
Pte5g01316 284 Pfam Chlorophyll A-B binding protein 86 247 IPR022796 -
Pte5g01316 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 273 IPR001344 GO:0009765|GO:0016020
Pte5g01316 284 SUPERFAMILY Chlorophyll a-b binding protein 84 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01316 Pte-Chr5 35248101 35250054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01316 3 285 Chloroplast and Mitochondria Gene Families AT4G10340 83.451 2.55e-157 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01316 K08916 - twl:119991788 498.434