Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01301 ATGAGGGTACCTTCAGATATGGAGCCAATCTATGGGACGATGTCGGTGATGGGGAGGTCACGTGTGGTGGAGGACGCCATTGCCGTTGTGACCAATCTCTGCAGACCCAAGATTTCAGAACAGTCGCCTGTTCATTTTTTTGGCGTTTATGATGGACATGGCGGGCCCCACGTAGATCTCTCTCAACGCTCTATTTCTGAGGGTATAGTTGTAGTTTTAATAGCGTTGACTGATAAGTACGGTCTCTATTGTATTCAGGTAGCAGCTTTATGTAGGAACATGATGCACACGATATTGGAAGAGGAGCTAATGCGCGTGGTATTGATGCCCAAAAGTGAGAGTGGGGAAAGCTCGTGTTCGAGGGCAGCGGAAGTTTTCGTGAAGGATGTCGGAGACGGTGAATGTGTTGTCGTACAGTTGTGGAAGGCAGTGCTGAGACAGAGCTTTGTGAGAATGGATGTTGCGGCATCGAAACCCAACGCGTGTGGGAGTCTGGCTTATCAATGTGGGTGGCGCTGTGTGGAAGTGGTTCCCGGTGGTTCTACGGCCGTGGTGTTGGCCCTGACATCAGAGCACATTGTGGTCGCTAACTGCGGCGACTCACGCGCTGTCCTTTGCCGTGGTGGAAGAGCCATTCCACTCAGTCATGATCACAAGCCTGACAGACCGGATGAACTTGCCAGAATTGAAGCTGCAGGAGGCCGAGTCATCTTTGTGAATGAAGCTAAAGTTGAAGGAATTCTACCCATGTCCCGAGCAATAGTTAGATGCATGGCTAAACCCAGAATTCTAATTAGGCTTATGTTATATATGCATCACGAAACGGCTAGCTGCTTGCTTGTTAAGGAACTCAATGATAACAATGACCTTGTTACCATGCCTAACGCCGTCTTACCTGTGTATCTATATTTTACTTGGTCATATGGTTATGTACTTATTTTCTTGAGAAGTTACATGTCGTCTTCACAAGCTGGTGATAAGTATCTGAAGCCTTTTGTGACACCAGAGCCTGATGTAACTGTCACAAAAAGATCACCATGTGATGAATGCTTAATCGTCGCAACGGACGGTTTGTGGGATGTTATTTCAAGTGAATTGGCTTGTTATATAGCTCTTAAGTTTCTTGGGGAAGTTGAATATGCAGCAATTGCCACCTCAAACACAGACCTTAATGATGAAATATCCATGGAAGATGGCAACACTCGTGAACCACTGCAAACATCAGGAAGCAATTTGGCAGCTGCATCGCTCACTCGCCTTGCCTTGGCCAGGAGAAGCTCTGGTAACATCAGTGTCATAGTGGTAGATTTGAAGAGGCTATGA 1323 0.4686 MRVPSDMEPIYGTMSVMGRSRVVEDAIAVVTNLCRPKISEQSPVHFFGVYDGHGGPHVDLSQRSISEGIVVVLIALTDKYGLYCIQVAALCRNMMHTILEEELMRVVLMPKSESGESSCSRAAEVFVKDVGDGECVVVQLWKAVLRQSFVRMDVAASKPNACGSLAYQCGWRCVEVVPGGSTAVVLALTSEHIVVANCGDSRAVLCRGGRAIPLSHDHKPDRPDELARIEAAGGRVIFVNEAKVEGILPMSRAIVRCMAKPRILIRLMLYMHHETASCLLVKELNDNNDLVTMPNAVLPVYLYFTWSYGYVLIFLRSYMSSSQAGDKYLKPFVTPEPDVTVTKRSPCDECLIVATDGLWDVISSELACYIALKFLGEVEYAAIATSNTDLNDEISMEDGNTREPLQTSGSNLAAASLTRLALARRSSGNISVIVVDLKRL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01301 440 Pfam Protein phosphatase 2C 325 377 IPR001932 -
Pte5g01301 440 Pfam Protein phosphatase 2C 175 257 IPR001932 -
Pte5g01301 440 SUPERFAMILY PP2C-like 10 438 IPR036457 -
Pte5g01301 440 ProSitePatterns PPM-type phosphatase domain signature. 46 54 IPR000222 GO:0043169
Pte5g01301 440 SMART PP2C_4 1 435 IPR001932 -
Pte5g01301 440 CDD PP2Cc 10 437 IPR001932 -
Pte5g01301 440 ProSiteProfiles PPM-type phosphatase domain profile. 10 437 IPR001932 -
Pte5g01301 440 PANTHER PROTEIN PHOSPHATASE 11 437 IPR015655 GO:0004722|GO:0006470
Pte5g01301 440 Gene3D - 4 439 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01301 Pte-Chr5 35081373 35082928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01301 320 438 PP2C-type Phosphatase Gene Family AT5G51760 52.941 1.12e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01301 K14497 - cave:132180833 253.832