Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01300 ATGCCATCACGCCAGCTCTCATCACCGTCTTTGACTCCATCTTCACCGAAACAAACCCTCCAATCTAATTACCTCATTCAACCTCTGCTGGCCTCAACTGTCTCCATTTGCTCGCTCTTCCTTCTCATAACCCTTTGCTGTTTCAAAGTCACTAGAAAACGCACAACCCCTTCAACTGATCCGGACTCTAAACCCCCTTACCGATTTTCCTTCTCTATTCTGCGAAGTTCTACCTCAAATTTCTTTACCCGTATAGGACATGGCGGCTTTGGTCCTGTCTTTTCCGGTACTTTGCCAAGAACTCACCAATCCGTTGCTGTGAAGCTCATGGATACTGCGTCACTGCAAGGCGAACGAGAGTTCCACAACGAACTTTTCTTCGCTTCCAGGCTTCATTCTCAGTATGTTGTATCTGCCATTGGCTTCTGCTCTGATAGAAAGCCGCCTAGGTTCTTGCTTGTATATGATTTGATGCCTAATGGCAATTTACAGGACGCACTGTTAAGCCGTAGGTGTCCTGAATTGATGGAATGGAGAAAACGTTTTTCTGTTATTGTCGATATAGCTAATGGTTTACAATATCTTCATTCATGTGGTCCTCCTGTTATTCATGGGGATATTAAACCTAGTAATATTTTGTTAGATAGGTATTTTTCTGCTAAGATTGGGGATTTTGGGCTGGCAAGGTTTAAATCCGAAAAAGAATTTGAGGGTGGGGTTTCTGGGATTGGTGATTTGGGGAAAGCAAATGTTGGGTTGGTTTCAGATGTTAACAAGAGAGTGGAGTGTAATGGTGGGGGTGGGAATGATGATTGTGACACAGGGGCAGAGGGAATAGGGAGTGTGAATACTGGTTTTGATGAGTCTTTTGTTTGGGTGGAGCATTCATCCGAGGGTGTTGTGAGGATACTAATTTCAGAGACTTCCTCAGAGACAATTGAGGCGGAAACAGCGTCACCTGAGACAGTTACCGTGGTGGAATCTGCTTCGGAGGGGAATTTTGATTGTGTAAGTGTTGAGGGTGAGAAAGAAATTAAAGGACGTAATAAGAGTAGGAATGGTGGGAAAAGTTGTCTAAGGAAAGACTGGTGGTGGAAGCAAGATGATGATGCAGCTGTATCTGCTAAAATTAAAATGGTGAAAGATTATGTTGTGCAATGGATTGGAACTGAAATAAATATAGAGGGGCCAAAGAGGGATTGTGGGGCGTCTACTTCTTCAAGTACTGGAATCGCGACTAGCAAGGTTGATAAAAAGAAGAACAGGAAGAGATTGGAATGGTGGATGTCCATGGATATGGAGAGGACCATGGGGCTTTCAAAGAAGCAAAAGTGTGAGCTATCAAGGGAATGGTGGAAAGAGGAGTACATTGAAGAGCGTTCTAGAAAGAAAAAGAAGAAGAAACGGCAGCATAAAATAGGGAATGACGATTTGTATGTGAAGAAAAAGGATAAGATGAAAAGTCTAAGTGGGGGCAGGCGCAGTGGCATAGATTGGTGGTTGGAAGGACTCAGTGGAGAAATTCCAAAAAGTGATGCTGTTAGCAGTACTCCAAGTATGAGGGGAACAGTTTGCTATGGTGCTCCTGAATATTGTTATCCAGGAGATGTATCAGAGAAATGTGATGTATACAGCTTCGGCGTGCTACTATTGGTTGTTGTCTCTGGGCGGCGGCCGCTTCAGGTGACTGATTCACCATTATCAGAATTTCATCGTGCAAATCTTTTGTCTTGGGCACGTCATTGTGCTCGTAGGGGAAAACTGCTTGAGCTTGTTGATAAGTCCATCCAGTCATTAGATGCAGAACAAGCTAGCCTCTGCATTACAGTTGCACTCCTTTGTTTGCAAAAGTCGCCTTCACGTCGACCATCCATGAATGATGTTGTGGGGATGCTTACTGGAGATTTGCAGCGACCCCAATTACCAGATGAGTTGCTATCCTCAGCTACATCTCATTTCTCGTTTAAGTCCCGAAAGCATATATTTCTGAAATTCATGGCACTGAAGAAGCATAAATTGGTGGACCGATACTTTGCTGTGAGGGAAAGCTTTTGGATCTATCCTATGAATAACAGTGTTGTTGATGGGTATCTAGTCTTAATAAGCTGA 2109 0.4362 MPSRQLSSPSLTPSSPKQTLQSNYLIQPLLASTVSICSLFLLITLCCFKVTRKRTTPSTDPDSKPPYRFSFSILRSSTSNFFTRIGHGGFGPVFSGTLPRTHQSVAVKLMDTASLQGEREFHNELFFASRLHSQYVVSAIGFCSDRKPPRFLLVYDLMPNGNLQDALLSRRCPELMEWRKRFSVIVDIANGLQYLHSCGPPVIHGDIKPSNILLDRYFSAKIGDFGLARFKSEKEFEGGVSGIGDLGKANVGLVSDVNKRVECNGGGGNDDCDTGAEGIGSVNTGFDESFVWVEHSSEGVVRILISETSSETIEAETASPETVTVVESASEGNFDCVSVEGEKEIKGRNKSRNGGKSCLRKDWWWKQDDDAAVSAKIKMVKDYVVQWIGTEINIEGPKRDCGASTSSSTGIATSKVDKKKNRKRLEWWMSMDMERTMGLSKKQKCELSREWWKEEYIEERSRKKKKKKRQHKIGNDDLYVKKKDKMKSLSGGRRSGIDWWLEGLSGEIPKSDAVSSTPSMRGTVCYGAPEYCYPGDVSEKCDVYSFGVLLLVVVSGRRPLQVTDSPLSEFHRANLLSWARHCARRGKLLELVDKSIQSLDAEQASLCITVALLCLQKSPSRRPSMNDVVGMLTGDLQRPQLPDELLSSATSHFSFKSRKHIFLKFMALKKHKLVDRYFAVRESFWIYPMNNSVVDGYLVLIS* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01300 702 Gene3D Transferase(Phosphotransferase) domain 1 502 644 - -
Pte5g01300 702 SMART serkin_6 79 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01300 702 SUPERFAMILY Protein kinase-like (PK-like) 58 646 IPR011009 -
Pte5g01300 702 Pfam Protein tyrosine and serine/threonine kinase 83 234 IPR001245 GO:0004672|GO:0006468
Pte5g01300 702 Pfam Protein tyrosine and serine/threonine kinase 503 631 IPR001245 GO:0004672|GO:0006468
Pte5g01300 702 ProSiteProfiles Protein kinase domain profile. 79 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01300 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pte5g01300 702 PANTHER OS07G0586332 PROTEIN 1 660 IPR044576 -
Pte5g01300 702 Gene3D Transferase(Phosphotransferase) domain 1 68 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01300 Pte-Chr5 35065923 35068978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01300 522 655 Receptor kinase-like Gene Family AT3G58690 33.088 7.92e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pte5g01300 PK_Tyr_Ser-Thr 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01300 - - qsa:O6P43_005511 718.383