Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01298 ATGCTACGAACCATTTTCATAAAGACAATAAGATTGGAGAGGGCGGTTTTGGAAGTGTCTATTCGGGGCAGACAAGTAAAGGTGCAGAGCAATGAACGCAAAGCAGAGATGGAGTTTGCAGTAGAAGTTGAAGTCCTGGGGAGGGTGAGGCATAAGAACTTGCTTCATTTAAGAGGGTTCTACGCTGGTGGAGAAGAAAGGTTAATTGTCTACGATTACATGCCTAAGCATAGCCTTGTTACCCATCTGCATGGTCATCTTGCTGTAGATGGCCTACTAGATTGCCAAAGGAGAATCGACATAGCTATTGGAGCAGCTGAAGGTTTAGCGTATTTGCATCACGAGGCAAACCATCATATCATACACAGAGACATAAAGGCCAGCAATGTCCTACTAGACACTGATTTTCAGGCCGAAGTAGCCGATTTTGGTTTTGCAAAGCTTATCCCATATGGTGTGTCCCACATGACAACTGGGGTTAAAGGAACTCTTGGATATTTGGCTCCAGAATATGCAATGTGGGGAAAAGTGTCAGAAAGTTGTGATGTCTATAGCAATGTGTCCCTCGTTCATTTTGTAGTTTTGTATCTTGGTCAGGTAGCAATGCTATCTAGTTAG 618 0.4353 MLRTIFIKTIRLERAVLEVSIRGRQVKVQSNERKAEMEFAVEVEVLGRVRHKNLLHLRGFYAGGEERLIVYDYMPKHSLVTHLHGHLAVDGLLDCQRRIDIAIGAAEGLAYLHHEANHHIIHRDIKASNVLLDTDFQAEVADFGFAKLIPYGVSHMTTGVKGTLGYLAPEYAMWGKVSESCDVYSNVSLVHFVVLYLGQVAMLSS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01298 205 FunFam Os07g0541700 protein 74 163 - -
Pte5g01298 205 Gene3D Phosphorylase Kinase; domain 1 14 74 - -
Pte5g01298 205 PANTHER OS01G0253100 PROTEIN 25 185 - -
Pte5g01298 205 SMART serkin_6 4 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01298 205 Gene3D Transferase(Phosphotransferase) domain 1 75 196 - -
Pte5g01298 205 Pfam Protein kinase domain 26 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01298 205 SUPERFAMILY Protein kinase-like (PK-like) 26 185 IPR011009 -
Pte5g01298 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01298 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01298 Pte-Chr5 35045814 35047108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01298 24 185 Trihelix Transcription Factor Family AT1G70460 48.765 1.12e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pte5g01298 Pkinase 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01298 - - twl:119985868 273.478