Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01287 ATGGAGTGCAATCGCGATGAAGCCCAGAGAGCAAAACAAATTGCTGAGAAGAAGTTTCTTGCAAAGGACATTTTTGGAGCCAAAAAGTTTGCTTTAAAAGCTCAAAATCTCTTTCCTGGACTAAAAGGTATTTCAAGTATGTTAGCAACCCTTAATGTGTACATTGCTGCTGAGAATAAGGTATGTGGTGAAGCGGATTGGTATGGTATACCTGGTCTGGATCCATTGGCTGATGAAGAGAAAGTGAGTGAAGAACCTGTTTCTTACAGTTTTGATAAACAAGCAAATACGAACAAATCAGTTGGAGGTGATGCAGCATTCAAGCTAATCTCTGAGGCTTGGAGCTTACTGTCTGATAAGGATAAAAGAATGGCATATGACCTGAAGAGAAATACAAAAGTTCAGAAAGTTTCAGCGGCTAGTGGAGGACCGTCAGTGGCAAAAGGGACAAACAGTGTGCACAAATGGGCTGTTCACTTTTGTATGTACTTCTTGCCTATTCGGCTGTTCACATTTGTAGGTTCTACTGGAGATAAATAA 540 0.4056 MECNRDEAQRAKQIAEKKFLAKDIFGAKKFALKAQNLFPGLKGISSMLATLNVYIAAENKVCGEADWYGIPGLDPLADEEKVSEEPVSYSFDKQANTNKSVGGDAAFKLISEAWSLLSDKDKRMAYDLKRNTKVQKVSAASGGPSVAKGTNSVHKWAVHFCMYFLPIRLFTFVGSTGDK* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01287 179 SUPERFAMILY Chaperone J-domain 100 161 IPR036869 -
Pte5g01287 179 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pte5g01287 179 Gene3D DnaJ domain 63 164 IPR036869 -
Pte5g01287 179 PANTHER BNAC03G44070D PROTEIN 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01287 Pte-Chr5 34901498 34902782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01287 4 138 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.496 4.90e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01287 - - jre:109010063 200.29