Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01267 ATGGCTAACGGTATTGAAGCAAATAAGGTAATGAAGGAAATAGAGGCAAGCAAACCGACACGGAATGCTATGGTGATTGGAGGGTTAAGTCCACTGAGTGAGACGCTTTGGAGGGAGAAGACTAATACAGAATTCATTGGCGATGTATCAGCTAGGCTCACATGGAAGGATCTGACTGTGATGGTCACTCTTGGTAAAGGAGAGACACAGAATGTTTTGGAAGGTCTTACTGGTTATGCTGAACCTGGAACTTTCACAGCTCTCATGGGTCCTTCTGGTTCAGGAAAATCAACTTTGCTTGATGCTCTTTCTGGTCGCTTAGCTGCAAATGCATTCCTTTCAGGCTCTATCCTTCTAAATGGCCGTAAAGCAAATCTCTCTTTTGGCACTGCAGCTTACGTGACTCAAGATGACAACTTAATTGGAACTTTAACTGTGAGAGAAACAATATCTTATTCGGCTCGTCTACGTCTTCCTGATAAGATGCCATGGTCGGAGAAGCGAGTACTAATTGAGAGTACCATTGTGGCAATGGGGCTTCAGGATTGTGCTGACACAGTCATTGGAAATTGGCATTTACGCGGGATCAGTGGTGGAGAGAAACGACGGGTTAGCATTGCACTGGAAATTTTGATGAGGCCTAGATTGCTTTTCCTTGACGAGCCAACGAGTGGACTAGACAGTGCTTCAGCTTTCTTTGTAACACAGACTCTTCGAGCCCTAGCAAGAGATGGAAGGACAGTGATAGCATCTATTCACCAGCCCAGCAGTGAAGTCTTTGAATTATTTGACAAGTTGTACTTGCTTTCTGGTGGAAAAACAGTTTATTTTGGCAAAGCGTCGGAAGCATATGAATTCTTTGCGCAAGCAGGCTTTCCCTGTCCGAAGTTGAGGAATCCTTCTGATCATTTTCTGAGATGCATCAATTCTGACTTCGATAAAGTCAAAGCCACTCTCAAAGGTTCCATGAAACTGAGGTTTGTAGCCAGCGATGATCCTCTGGACAAGACCACAACAGCTGAAGCTACCAGAACTCTCATCGACTTCTACCATACATCTCAATACTCTTTTGCAGTAGAACAAAACGTAGAGGAGATATCCAAATTTAAAGGAACTGTGTTAGATTCAGGAGGAAGCCAGGCTAGTTTCTTAATGCAGGCTTATACCTTGACAAACCGCTCATTCATCAATATGTCAAGAGACTTTGGTTACTATTGGCTTAGGCTCGTAATTTACATTGTTGTAACCATCTGCATTGGAACCATCTACTTGAACGTCGGAACACATTACAATTCAATCCTGGCAAGAGGCTCATGTGCATCCTTTGTCTTTGGCTTTGTGACATTCATGTCAATTGGGGGGTTTCCTTCATTTGTGGAGGACATGAAGGTTTTCCAAAGAGAAAGGCTTAATGGCCATTATGGAGTCACTTCCTTTGTCATCAGCAATACATTGTCTGCAATGCCATTTCTGATATTGATTACTTTTCTCTCTGGAACAATTTGTTACTTCTTGGTTCGCCTTCATCCTGGTTTTGAGCATTATATATTCTTTGTGCTGTGCCTCTATCCTAGTATCACAGTGGTTGAAAGTTTAATGATGGTCATTACCGATGGTCATTACCATCATTGTACCCAATTTTCTAATGGGTATCATCATAGGTGCTGGAATTCAGGAAAAACTTCTCAATATTCACAATACAGTTTAGTCATTAGCCTAACCCTCAATGCTTTTGAAACTTTTCATGAGTCGTTTGATCGCAAAATATATGAATGA 1776 0.42 MANGIEANKVMKEIEASKPTRNAMVIGGLSPLSETLWREKTNTEFIGDVSARLTWKDLTVMVTLGKGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSGRLAANAFLSGSILLNGRKANLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSEKRVLIESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDKLYLLSGGKTVYFGKASEAYEFFAQAGFPCPKLRNPSDHFLRCINSDFDKVKATLKGSMKLRFVASDDPLDKTTTAEATRTLIDFYHTSQYSFAVEQNVEEISKFKGTVLDSGGSQASFLMQAYTLTNRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTHYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTSFVISNTLSAMPFLILITFLSGTICYFLVRLHPGFEHYIFFVLCLYPSITVVESLMMVITDGHYHHCTQFSNGYHHRCWNSGKTSQYSQYSLVISLTLNAFETFHESFDRKIYE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01267 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 292 IPR027417 -
Pte5g01267 591 SMART AAA_5 82 253 IPR003593 GO:0016887
Pte5g01267 591 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 296 IPR003439 GO:0005524
Pte5g01267 591 Pfam ABC-2 type transporter 253 309 IPR043926 GO:0140359
Pte5g01267 591 FunFam ABC transporter G family member 11 47 290 - -
Pte5g01267 591 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524|GO:0016887
Pte5g01267 591 Gene3D - 46 291 IPR027417 -
Pte5g01267 591 Pfam ABC transporter 75 224 IPR003439 GO:0005524
Pte5g01267 591 CDD ABCG_EPDR 50 278 - -
Pte5g01267 591 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 41 537 - -
Pte5g01267 591 Pfam ABC-2 type transporter 386 536 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01267 Pte-Chr5 34729678 34732566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01267 83 257 Calmodulin-binding Proteins AT2G36910 32.967 5.97e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01267 K05681 - tcc:18604500 955.281