Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01263 ATGCCTGTTCGAAGGTATGCATTTGGGAGAGCGGATGAGGCTACACATCCAGACTCCATGAGAGCAACTCTAGCTGAATTCCTCTCCACTCTCGTCTTTGTTTTTGCTGCAGAAGGCTCTGTGTTAGCCCTTGACAAGATTTACACAGGAACAGCATCATCAGCTTCTGAGCTAGTTGCTGTTGCACTAGCGCATGCCTTCGCACTTTTTGCTGCCATATCTTCTAGCTTCAACATCTCAGGGGGACATGTCAATCCTGCTGTCACCTTCGGCGCCCTCGTCGGCGGAAGGCTTTCTCTAGTTCGTGCCTTGTACTATTGGATTGCACAACTGCTTGGTGCCGTTGTTGCTGCCGTCTTGTTGAGGCTAGTCACTGCTGGCATGAGACCTGAGTCGTCCCATGTATCTTCAGGGATTGGAGAAATTCATGGTCTCCTATTTGAGATAGTGATGACATTTGGTTTGGTCTACACGGTGTATGCCACTGCCATTGATCCAAAAAGAGGGAGTTTGGGGACAATAGCTCCACTATCAATTGCATTCATTTTGGGGGCTAATATCCTTGTAGGTGGACCATTTGATGGAGCATCCATGAACCCGGCAAGGGCGTTCGGACCTGCATTGGTGGGATGGAGATGGAAGAACCACTGGATCTATTGGGTTGGTCCATTCATAGGAGGAGGGCTTGCAGGAGTGATATATGAATTCCTGGTGATGCCAACAGAGCCACCTCTTCATACTCACCAACCATTGGCTCCAGAAGACTACTAA 771 0.4903 MPVRRYAFGRADEATHPDSMRATLAEFLSTLVFVFAAEGSVLALDKIYTGTASSASELVAVALAHAFALFAAISSSFNISGGHVNPAVTFGALVGGRLSLVRALYYWIAQLLGAVVAAVLLRLVTAGMRPESSHVSSGIGEIHGLLFEIVMTFGLVYTVYATAIDPKRGSLGTIAPLSIAFILGANILVGGPFDGASMNPARAFGPALVGWRWKNHWIYWVGPFIGGGLAGVIYEFLVMPTEPPLHTHQPLAPEDY* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01263 256 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte5g01263 256 Gene3D Glycerol uptake facilitator protein. 4 245 IPR023271 -
Pte5g01263 256 FunFam Probable aquaporin TIP1-1 4 252 - -
Pte5g01263 256 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 PANTHER AQUAPORIN-8 6 242 IPR034294 -
Pte5g01263 256 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte5g01263 256 SUPERFAMILY Aquaporin-like 13 247 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01263 Pte-Chr5 34704767 34705834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01263 4 257 Major Intrinsic Protein MIP AT1G17810 72.137 4.89e-127 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01263 K09873 - mnt:21390993 394.815