Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01231 ATGGCGCTTGTAGAAGCTCGTGATTCCAGTTCTTATCACAACAGAGTATGGAAATCTGAGTATGACGTGTTCTTAAGTTTCAGAGGGGAAGATACCCGCTTTGGTTTTACAGGTCATCTATACGATGCTTTGATTAGAGCAGGAGTCAAAACTTTTATAGACGATGAATGCCTAACAAGGGGTGCCGAAATCTCACCAGATCTGGTCAAAGCTATTGAGGGATCAAGGGCGTGTATCATTGTGTTTTCTGAAAACTATGCTTCTTCCAGTTGGTGTCTTGATGAGCTTGTCAAGATTCTTGACTGTATGGAGCTCAGAGGGCAGTTGGTTCTGCCTGTGTTTTACAAGATCGATCCTTCTATGGTAAGAAAACAAACAGGTCCTTATGAAAAAGCAATGGCTGAGTATGAAAACCAGCAGAGATATAACAATGATAAAGTCGCCCAATGGAGGTCTGCTTTGCGCCAAGCTGCAAACTTGTCTGGCTGGCATATAGAATTCGGGTATGAATTTCAGTTTATTCAGAGTATAGTTGAAAATGTTTCCAGCAGATTAAATCGCCAAATGTTGCATGTTACTGCTTACCCTGTAGGACTTGAGAGTCGCACATCACAAGTCATTTCACGATTGGGCCTTCAGGAGTTCAAGGATGATGTTCGCATGATAGGAATCTATGGGATGGGTGGGATTGGTAAATCGACAACAGCAAGAGCTTTGTATAACTTGATTGCTCCTCAATTTGATGGTGCATGTTTCCTTAGTGAAGTGAGAGAGAATTCTTCTCAGAGAGGAGGTTTAGTGGCTCTACAAGAAAAAATTCTTCGTGATATTCTTGGTGGTAAGAACAAGATGGAGTTGGGTGACGTCTACAAAGGAATCTCGGTCATCAGACAAAGATTGTGTGATAAGAAAATTCTTCTGATTCTGGATGATGTAAATAGATTAGAGCAGTTACAAACATTAGCTGGAATGCCTGAGTGGTTTGGCTCTGGCAGTAGAATACTGATAACAACAAGGGATAAGCATATGCTAACTGCTCATAACGTTACCAATACATATAAGGCGGATTTACTAGATGAAGTTGAAGCTTTGGAGCTCTTCAGTTGGCATGCCTTCGGGAGAAGACAACCAGACTCAATTTATCGGGACATTTCGAAGCGAGTGGTGAATTATGCTGAGTGCCTTCCACTGGCTCTTGAAGTAATAGGGAGAACTTTTATTGGTAGAAGGTTGGAGGACTGGGAAGATGCGTTAGATAAATATAAAAGCATCCCTGAAGGAGATATCGTTAACAAACTTAAAATAAGCTATGATGAACTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATGTTTCTTCAAGGGAGAGGGTTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTGTTGAGAGGGGACTTTTAACTGGGAGCTACCGTACGGTTCAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAGTTCGAAGGGAATCACCATCCAATGTTGGGGAACGTAGCAGATTGTGGCGTCAGGATGATATTATTCAAGTGTTAGCTGATGATATTGGAACGAATGCAGTAGAGGGTATCATGTTGGACGTGCCTGATGAGTCTGAATTGGAGGAGATAGAATGGAATGGCGAGGGTTTTAAAAAGATGAAGAATTTGAGAATACTCATAATAAGGAATGCATGTTTTTCTACTGCCCCAACGTATCTACCTAACAGTTTGAGAGTTCTTCATTGGGAGAACTATCCTTCATCATTTTTTCCACCACCTAGCTTTCATCCAAGGAAACTCGTCGTACTCAAAGTCCCTCATAGTCATCTCACATTGACAGAAAAGCCATTCAAGAGATTGGAGGCTCTAACACAAATGGATTTCTCATTCTGTGACTTCATAACTAAAGTACCTGACTTGTCTGGAGTCCCAAATTTAGAAGAACTTGACCTAAGAGGATGTCTGAATTTGGTCGAGGTTCATGATTCTGTTGGATCTCTTGGCAAGCTTGTCGAATTAACTGCCTCTGGATGTTGTGAGCTTACGACACTTCCTCAAGCCTTGAAGCTTAGGAAACTTAAAACACTTTACCTTGTCGGTTGCCCCAAACTTAGGCGATTTCCAGACATACAGGAACCAATGGAAAATCTTAAGGACCTTAATTTAGATGGAAGTGGTATTGAAGCATTTCCATCTTCAATTAAATATATGACTACATTGACTTTCTTCCATTTGTATAATTGCAAAAGACTGGAGTTTGTTCCGCATACCATTGCCCAGATGCAATCACTTAAGTTTCTTTACTTCAATTATTGTCCACTGATTGGAAATGCTCTTTCAAGTTGGGTTGAATCTACTGAAGAGGATTGCTCAACATCATCATCGTCGTTGTCATTGTCATTAAAATCATTTGATCTCAATATCTGTTATAATATTTCAGAGCTCGAACTAGATGGCTGCAATTTACTAGATGAACACCTTGTCTTGATTCCCATGCTTTTCCCCTTGCTGCAATTATTGTCTCTAAGAAAAAATCCGTTTGAAGTTATTCCAGAGTGCTTCCAAGCATTCCAACATCTAGAGGTCCTGCATTTGGATGAGTGTAGGAAGCTTCAAGAATTTCCAAATATCCTTCCAGATATGCCAAAATTGATAAATATAAGTACTAAGAATTGCGTGGTATTGAGCCTACAGTCTGTGGCTTTCTTTTTGAAGGATATGGTGAAGAGATATTACAGTTCAGCCGGGGCAATTTCTAGTCCATCTGTGGATCCTCATTTTGGTTATATTCCACTTCCAGGATGCAGAATCCCTGAATGGTTTCATCATCGTTCAGAGGGGAAGTCAATATCCTTTTATGCACGTGGAAATTACTTCCCACATTTTCTTTTGTGTATTTGTTTTGATGTAAATCGGGCTACAACGCCAATCGCAGAGTTAGTTATATCCATCAATAATGACAAACACAGCTTTGAATTTACACACAACTTTCCTGAAGGCGGTTGCAATCCACTGTGGATGCTTGATCCAATAGAGTATCCTCCTTATAGCTATAAATTTCATGTAACACGAAACTGGAATACTGCTGATTGGAATCATGTGGAGGTTTGTTTATACTTTGAAAGTACGTCAACATCATTGGCGATCAAGCAGTATGGTATTCACTTTGACGAAGAAACCTGTATTCGCTTCTCATATCCTGCAGGCACGACATGGCAATGGGACTATATTATATGCAAGACATCTCTCTCTCAGAAATTGAAAGACTTTCTTCGGCAGCTTTGGCATGAAGCTCTGCCATTTGGTTGGATTCGAGGCGAGATATGCCTTTTCTGCCAAGAATCGCTCGATTATTCGCTTCACCTTTTCAGTCGTTGCCCTATCACCATGCAAGTATGGAGTTTATCTCCATTGCAATTTCGCTCGGATTGGATTGTGGCGCACGACTTCCAACATTGGTTCTGCAGAGTGCTGGATTTTCTTCAGTCGACGGGTGACTTTGAAGAAACATTTAACATTTTTGCTTGGCACCTGTGGGCAATCTGGCAAGCTAGAGCTGATAGGCTCTTTGAAGTGTCATTTAGATCACCGCCAGATATTGTAAGGCATGCAATGTCTTTTTACCAAGAGGCGAAATATGGAAGAACACTATTTGCTCATTGA 3705 0.4067 MALVEARDSSSYHNRVWKSEYDVFLSFRGEDTRFGFTGHLYDALIRAGVKTFIDDECLTRGAEISPDLVKAIEGSRACIIVFSENYASSSWCLDELVKILDCMELRGQLVLPVFYKIDPSMVRKQTGPYEKAMAEYENQQRYNNDKVAQWRSALRQAANLSGWHIEFGYEFQFIQSIVENVSSRLNRQMLHVTAYPVGLESRTSQVISRLGLQEFKDDVRMIGIYGMGGIGKSTTARALYNLIAPQFDGACFLSEVRENSSQRGGLVALQEKILRDILGGKNKMELGDVYKGISVIRQRLCDKKILLILDDVNRLEQLQTLAGMPEWFGSGSRILITTRDKHMLTAHNVTNTYKADLLDEVEALELFSWHAFGRRQPDSIYRDISKRVVNYAECLPLALEVIGRTFIGRRLEDWEDALDKYKSIPEGDIVNKLKISYDELDDFERKIFLDIACFFKGEGYEYVRRILEASDLNPTIGLKKLVERGLLTGSYRTVQMHCLIQEMGREIVRRESPSNVGERSRLWRQDDIIQVLADDIGTNAVEGIMLDVPDESELEEIEWNGEGFKKMKNLRILIIRNACFSTAPTYLPNSLRVLHWENYPSSFFPPPSFHPRKLVVLKVPHSHLTLTEKPFKRLEALTQMDFSFCDFITKVPDLSGVPNLEELDLRGCLNLVEVHDSVGSLGKLVELTASGCCELTTLPQALKLRKLKTLYLVGCPKLRRFPDIQEPMENLKDLNLDGSGIEAFPSSIKYMTTLTFFHLYNCKRLEFVPHTIAQMQSLKFLYFNYCPLIGNALSSWVESTEEDCSTSSSSLSLSLKSFDLNICYNISELELDGCNLLDEHLVLIPMLFPLLQLLSLRKNPFEVIPECFQAFQHLEVLHLDECRKLQEFPNILPDMPKLINISTKNCVVLSLQSVAFFLKDMVKRYYSSAGAISSPSVDPHFGYIPLPGCRIPEWFHHRSEGKSISFYARGNYFPHFLLCICFDVNRATTPIAELVISINNDKHSFEFTHNFPEGGCNPLWMLDPIEYPPYSYKFHVTRNWNTADWNHVEVCLYFESTSTSLAIKQYGIHFDEETCIRFSYPAGTTWQWDYIICKTSLSQKLKDFLRQLWHEALPFGWIRGEICLFCQESLDYSLHLFSRCPITMQVWSLSPLQFRSDWIVAHDFQHWFCRVLDFLQSTGDFEETFNIFAWHLWAIWQARADRLFEVSFRSPPDIVRHAMSFYQEAKYGRTLFAH* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01231 1234 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 804 IPR044974 GO:0006952
Pte5g01231 1234 Pfam TIR domain 21 187 IPR000157 GO:0007165
Pte5g01231 1234 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 163 IPR035897 -
Pte5g01231 1234 Gene3D - 188 353 IPR027417 -
Pte5g01231 1234 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pte5g01231 1234 Gene3D Ribonuclease Inhibitor 547 811 IPR032675 -
Pte5g01231 1234 SMART till_3 20 160 IPR000157 GO:0007165
Pte5g01231 1234 Pfam C-JID domain 946 1069 IPR045344 -
Pte5g01231 1234 SUPERFAMILY L domain-like 496 915 - -
Pte5g01231 1234 Gene3D - 18 187 IPR035897 -
Pte5g01231 1234 Gene3D Ribonuclease Inhibitor 812 918 IPR032675 -
Pte5g01231 1234 Gene3D - 357 441 IPR042197 -
Pte5g01231 1234 PRINTS Disease resistance protein signature 221 236 - -
Pte5g01231 1234 PRINTS Disease resistance protein signature 299 313 - -
Pte5g01231 1234 PRINTS Disease resistance protein signature 392 406 - -
Pte5g01231 1234 PRINTS Disease resistance protein signature 655 671 - -
Pte5g01231 1234 Pfam NB-ARC domain 213 427 IPR002182 GO:0043531
Pte5g01231 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 451 IPR027417 -
Pte5g01231 1234 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01231 Pte-Chr5 34032141 34185413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01231 20 786 WRKY Transcription Factor Family AT4G12020 31.226 6.84e-91 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01231 - - ccaj:109810288 860.136