Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01221 ATGGCGCTTATAGAAGCTCGTGATTCCTGTTCGTATCCCAACAGAGTATGGAAATTTGAATATGACGTGTTCTTAAGTTTCGGAGGGGAAGATACCCGCTATGGTTTTACAGGTCATCTATACCATGCTTTGATTAGAGCAGGAGTCAAAGCTTTTATGGACTTTGATTGCCTTACAAGGGGTGTCGAAATCTCACCAGAGCTGGTCAAAGCTATTGAGGGATCAAGGGCGTGTATCATTGTGTTTTCTGAAAACTATGCTTCTTCCAGATGGTGTCTTGATGAGCTTGTCGTGATTCTTGACTGTATGGAGCTCAGAGGGCAGTTGGTTCTGCCTGTGTTTTACAAGATCGATCCTTCTATGGTAAGAAAACAAACAGGTCCTTATGAAAAAGCGATGGCTGAGTATGAAAACCAGCAGAGATATAACAATGATAAAGTCGCCCAATGGAGGTCTGCTTTGCGCCAAGCTGCAAACTTGTCTGGCTGGCATATAGAATTCGGGTATGAATTTCAGTTTATTCAGAGTATAGTTGAAAATGTTTGCAGCAGAATAAATCGCCAAACGTTGCATGTTACTGCTTATCCTGTCGGACTTGAGTCTCGCACATCACAAGTCATTTCACGATTGGGCCTTCAGGAGTTCAAGGATGATGTTCGCATGATAGGAATCTATGGGATGGGTGGGATTGGTAAATCGACAACAGCAAGAGCTTTGTATAACTTGATTGCTCCTCAATTTGATGGTGCATGTTTCCTTAGTGAAGTGAGAGAGAATTCTTCTCAGAGAGGAGGTTTAGTGGCTCTGCAAGAAAAATTTCTTCGTGATATTCTTGGTGGTAAGAACAAGATCGAGTTGGGTGACGTCTACAAAGGAATCTCTGTCATCAGACAAAGATTGTGTGATAAGAAAATTCTTCTGATTCTTGATGATGCGAATAAACTAGAGCAGTTAGAAGCATTAGCAGGAATGCCTGATTGGTTTGGCCATGGCAGTAGAATACTGATAACAACAAGGGATAAGCATTTGCTAACTGCTCATAATGTTAGCAGCATATATGAGGTGGATTTATTAAATGAAGTTCAAGCTATGGAGCTCTTCAGTTGGCATGCCTTCGGGAGAAGACAACCAGACCCAACTTATAAGGACATTTCGAAACGAGTGGTGAATTATGCTGAGCGCCTTCCACTGGCTCTTGAAGTAATAGGAAGAGCTTTTAAGGGTAGAAGGTTGGAGGACTGTGAAGATGCGTTAGATAAATATAGAAGCATCCCTGAAGGAGATATCATTAGCAAACTAAAAATAAGCTATGATGATTTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATTTTTCTTCGAGGGAGAGGATTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTATTGAGAGAGGACTTTTAACATCCAATGTTGAAGAAACTTATTTTAGAAGCTACAGTACGGTTCAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAGTTCGAAGGGAATCACCATCCAATGTTGGGGAACGTAGCAGATTGTGGCGTCAGGATGATATTATTCAAGTGTTAGCTGATGATATTGGAACGAATGCAGTAGAGGGTATCATGTTGGACGTGCCTTATGAGTCTGAATTGGAGGAGATAGAATGGAATGGCGAGGGTTTTAAAAAGATGAAGAATTTGAGAATACTCATAATAAGGAATGCATGTTTTTCTACTGCGCCAACTTATCTACCTAACAGTTTGAGAGTTCTTCATTGGGAGAACTATCCTTCATCATTTTTCCCACCACCTGGCTTTCATCCAAGGAAACTCGTCGTACTCAAAGTCCCTCAAAGTCATCTCACATTGACAGAAAAGCCATTCAAGAGGTTCGAGGCTCTAACACAAATGGACTTCTCATTCTGTGACTTCATAACTAAAGTACCTGACTTGTCTGGAGTCCCAAATTTAGAAGTACTTGACCTAAGTGAATGTCTGAATTTGGTCGAGGTTCATGATTCTGTTGGATCTCTTGGCAAGCTTGACAAATTAACTTTCTCTAGATGTTGTGAGCTTACGACTCTTCCTCAAGCCTTGAAGCTTAGGAAACTTACAGAACTTTACCTAAACGGATGCTCCAAACTTAGGCGATTTCCAGACATACAGGAACCAATGGAAAATCTTGAGCAGCTTTATTTACATGGAAGTGGTATTGAAGCAGTTCCATCTTCAATTAAATATATGACTATTTTGGACTCCTTCCATTTTGTAAATTGCAAAAGACTGGAGTTTGTTCCGCATACCATTGCCCAGATGCAATCACTTACGGATCTTAACTTCTTTGATTGTCCACTGATTGGAAGTTGGTTTGAATCATTTGATCTCAATATCTGTTATAATATTTCATTCCTCTGTCTAGATGCCTGCAATTTACTAGATGCACACCTTGCCTCGATTCCCAAGCTTTTCCCATTGCTGAAATATTTGTCTCTAAAGAAAAATCCGTTTGAAGTTATTCCAGAGTGCTTCCGAGCATTCCAACGTCTAGACGAACTGGATTTGGATGACCCACAGTCTGTGGCTTTCTTTTTGAAGGAAATGGTAAAGGATGCAGAATCCCTGAATGGTTTCATCATCGTTCAGAGGGGAAGTCAATATCCTTTTATGCGCGTGGAAATTACTTCCCACATTTTCTTTTATGAAATCAAGATGCAACTGAACAAGGTGAAGGAAGCCTTCAAGCGGCAAGGTTAA 2787 0.4051 MALIEARDSCSYPNRVWKFEYDVFLSFGGEDTRYGFTGHLYHALIRAGVKAFMDFDCLTRGVEISPELVKAIEGSRACIIVFSENYASSRWCLDELVVILDCMELRGQLVLPVFYKIDPSMVRKQTGPYEKAMAEYENQQRYNNDKVAQWRSALRQAANLSGWHIEFGYEFQFIQSIVENVCSRINRQTLHVTAYPVGLESRTSQVISRLGLQEFKDDVRMIGIYGMGGIGKSTTARALYNLIAPQFDGACFLSEVRENSSQRGGLVALQEKFLRDILGGKNKIELGDVYKGISVIRQRLCDKKILLILDDANKLEQLEALAGMPDWFGHGSRILITTRDKHLLTAHNVSSIYEVDLLNEVQAMELFSWHAFGRRQPDPTYKDISKRVVNYAERLPLALEVIGRAFKGRRLEDCEDALDKYRSIPEGDIISKLKISYDDLDDFERKIFLDIAFFFEGEDYEYVRRILEASDLNPTIGLKKLIERGLLTSNVEETYFRSYSTVQMHCLIQEMGREIVRRESPSNVGERSRLWRQDDIIQVLADDIGTNAVEGIMLDVPYESELEEIEWNGEGFKKMKNLRILIIRNACFSTAPTYLPNSLRVLHWENYPSSFFPPPGFHPRKLVVLKVPQSHLTLTEKPFKRFEALTQMDFSFCDFITKVPDLSGVPNLEVLDLSECLNLVEVHDSVGSLGKLDKLTFSRCCELTTLPQALKLRKLTELYLNGCSKLRRFPDIQEPMENLEQLYLHGSGIEAVPSSIKYMTILDSFHFVNCKRLEFVPHTIAQMQSLTDLNFFDCPLIGSWFESFDLNICYNISFLCLDACNLLDAHLASIPKLFPLLKYLSLKKNPFEVIPECFRAFQRLDELDLDDPQSVAFFLKEMVKDAESLNGFIIVQRGSQYPFMRVEITSHIFFYEIKMQLNKVKEAFKRQG* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01221 928 Gene3D - 16 188 IPR035897 -
Pte5g01221 928 Gene3D - 357 441 IPR042197 -
Pte5g01221 928 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 163 IPR035897 -
Pte5g01221 928 SUPERFAMILY "Winged helix" DNA-binding domain 428 540 IPR036390 -
Pte5g01221 928 PRINTS Disease resistance protein signature 663 679 - -
Pte5g01221 928 PRINTS Disease resistance protein signature 392 406 - -
Pte5g01221 928 PRINTS Disease resistance protein signature 221 236 - -
Pte5g01221 928 PRINTS Disease resistance protein signature 299 313 - -
Pte5g01221 928 SMART till_3 20 160 IPR000157 GO:0007165
Pte5g01221 928 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Pte5g01221 928 Pfam NB-ARC domain 213 409 IPR002182 GO:0043531
Pte5g01221 928 SUPERFAMILY L domain-like 566 867 - -
Pte5g01221 928 Gene3D - 189 353 IPR027417 -
Pte5g01221 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 802 IPR044974 GO:0006952
Pte5g01221 928 Gene3D Ribonuclease Inhibitor 553 710 IPR032675 -
Pte5g01221 928 Gene3D Ribonuclease Inhibitor 711 874 IPR032675 -
Pte5g01221 928 Pfam TIR domain 21 186 IPR000157 GO:0007165
Pte5g01221 928 SMART AAA_5 218 359 IPR003593 GO:0016887
Pte5g01221 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 451 IPR027417 -
Pte5g01221 928 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01221 Pte-Chr5 33914560 33924799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01221 12 794 WRKY Transcription Factor Family AT4G12020 30.731 1.22e-91 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01221 - - qsa:O6P43_008369 767.303