Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01219 ATGGATGGGGATAACGGTTTGCATATTCATAATTGGGGTTACTATGAACCCCTTCCCCTGAAGGGACATTTGGGTCTTCAGCTAATGCCATCCATACCTGACAAACCTGTACTTGGAGCATGCAATCCTGCCACTATGGCTGGCATGAATGCATCATATCATTATCGTGATATCGGGGCTTCTCTAATAACATACCCTATGGACTATATGAGGGACGTTTGGATTAGTCAGAATCAGAAGGAGAAATATTTCAATATGGTTGCTGGAAATCCAAGTTGTTCTGTCATACCAGAGACTTCATTGACTCCTCGTATGCAAATGGTTCAACCACCTGATTTGTCAAAGGAGGAACGAGTAGCAGAAGAGGTAGCTCTGGTGAAGCCCAATGTCAGGAATAAGAAAAGAGAGGGAACAAAGATGCCAAAACCTCTGAAAGAAAAGAAGCTGAAGGGAGGTCTTCGTCGTACGAAGGATGATAAGACACCAGCCCTTGAGCAAGCAAGATCGGCAAAGAAGACTGCTGAAGTCACAATAAATGGGATTGGGTTGGACATCTCAAGTATCCCTATTCCAGTTTGCTCGTGCACTGGAACACCGCAACAATGCTACCGTTGGGGCTCTGGTGGGTGGCAATCTGCGTGTTGTACAACAATGATATCAATGCACCCCTTGCCCATGAGTACCAAGAGGCGTGGTGCCAGAATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTATTAGTGAAACTAGCTGCCGAAGGGTATGATTTCTCTAATCCTATTGATTTAAGGACTCATTGGGCAAAGCATGGTACCAACAAGTTTGTCACAATCAGGTAG 846 0.4456 MDGDNGLHIHNWGYYEPLPLKGHLGLQLMPSIPDKPVLGACNPATMAGMNASYHYRDIGASLITYPMDYMRDVWISQNQKEKYFNMVAGNPSCSVIPETSLTPRMQMVQPPDLSKEERVAEEVALVKPNVRNKKREGTKMPKPLKEKKLKGGLRRTKDDKTPALEQARSAKKTAEVTINGIGLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTMISMHPLPMSTKRRGARIAGRKMSIGAFKKVLVKLAAEGYDFSNPIDLRTHWAKHGTNKFVTIR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01219 281 PANTHER - 1 281 IPR010409 -
Pte5g01219 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Pte5g01219 281 SMART GAGA_bind_2 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01219 Pte-Chr5 33880359 33881985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01219 1 282 BBR or BPC Transcription factor family AT2G01930 48.148 7.94e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte5g01219 GAGA_bind 4.1e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01219 - - qsa:O6P43_008440 395.971