Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01209 ATGATAACAGACGCTGGTGATATTTTGTCATATGCGAGACTTTACTTCCATAGTAAGGACATTTCGAAACGTGTGGTGAATTATGCTGAGTGCCTTCCACTGGCTCTTGAAGTAGTAGGGAGAGCTTTTATTGGTAGAAGGTTGGAGGACTGGGAAGATGCGTTAGATAAATATAAAAGCATCCCTGAAGGAGATATCATTAGCAAACTAAAAATAAGCTATGATGATTTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATGTTTCTTCAAGGGAGAGGATTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTATTGAGAGAGGACTTTTAACGAAGAGCTACCATACGACGGTTGAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAGTTCGAAGGGAATCACCATCCAATGCTGGGGAACGTAGCAGATTGTGGCGTCAGGATGATATTATTCAAGTGTTAGCTGATGATATTGTAAGCATGACCATTTCTTTTCCTCCTTCACGAAATTCATCTAATGGCGTTTTCTTTGTCTTATAG 588 0.3946 MITDAGDILSYARLYFHSKDISKRVVNYAECLPLALEVVGRAFIGRRLEDWEDALDKYKSIPEGDIISKLKISYDDLDDFERKIFLDIACFFKGEDYEYVRRILEASDLNPTIGLKKLIERGLLTKSYHTTVEMHCLIQEMGREIVRRESPSNAGERSRLWRQDDIIQVLADDIVSMTISFPPSRNSSNGVFFVL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01209 195 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 170 IPR044974 GO:0006952
Pte5g01209 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 88 IPR027417 -
Pte5g01209 195 SUPERFAMILY "Winged helix" DNA-binding domain 65 170 IPR036390 -
Pte5g01209 195 Gene3D - 15 78 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01209 Pte-Chr5 33732871 33735388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01209 20 172 WRKY Transcription Factor Family AT5G45050 42.208 2.00e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01209 - - qlo:115981739 167.162