Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01198 ATGCCTGATTGGTTTGGCCATGGCAGTAGAATACTGATAACAACAAGGGATAAGCATTTGCTAACTGCTCATAATGTAAGCAGCATATATGAGGTGGATTTATTAAATAAAGTTCAAGCTATGGAGCTCTTCAGTTGGCATGCCTTCGGGAGAAGACAACCAGACCCAACTTATCAGGACATTTCGAAACGAGTGGTGAATTATGCTGAGTGCCTTCCACTGGCTCTTGAAGTAGTAGGAAGAGCTTTTAAGGGTAGAAGTTTGGAGGACTGTGAAGATGCGTTAGATAAATATAGAAGCATCCCGGAAGGAGATATCATTAGCAAACTAAAAATAAGCTATGATGATTTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATGTTTCTTCAAGGGAGAGGATTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTATTGAGAGAGGACTTTTAACGAAGAGCTACCATACGGTTCAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAGTTCGAAGGGAATCACCATCCAATGTTGGGGAACGTAGCAGATTGTGGCGTCAGGATGATATTATTCAAGTGTTAGCTGATGATATTGGAACGAATGCAGTAGAGGGTATCGTGTTGGACGTGTCTTATGAGTCTGAATTGGAGGAGATAGAATGGAATGGCGAGGGTTTTAAAAAGATGAAGAATTTGAGAATACTCATAATAAGGAATGCATGTTTTTCTACTGCGCCAACTTATCTACCTAACAGTTTGAGAGTTCTTCATTGGAAGAACTATCCTTCATCATTTTTCCCACCACCTGGCTTTCATCCAAGGAAACTCGTCGTACTCAAAGTCCCTCAAAGTCATCTCACATTGACAGAAAAGCCATTCAAGAGGTTGGAGGCTCTAACAAAAATGGACTTCTCATTCTGTGACTTCATAACTAAAGTACCTGACTTGTCTGGAGTCCCAAATTTAGAAGGACTTGAACTATGTGGATGTCCGAATTTGGTCGAGATTCATGATTCTGTTGGATCTCTTGGCAAGCTTGTCGTATTAATTGCCTCTAGATGTTGTGAGCTTACGACTCTTCCTCAAGCCTTGAAGCTTAGGAAACTTAAAACACTTTACCTTGAAGGATGCCGCAAACTTAGGCGATTTCCAGACATACAGGAACCAATGGAGAATCTTGAGTACCTTCGTTTAGATGGAAGTATTGAAGCAGTTCCATCTTCAATTAAATATATGACTATTTTGACGTCCTTCATATTGGAAAATTGCAAAAGACTGGAGTTTGTTCCGCATACCATTGCCCAGATGCAATCACTTAACTTTCTTTACTTCTATGATTGTCCACTGATTGGAAATGCTCTTTCAAGTTGGGTTGAATCTACTGAAGAGGATTGCTCAACATCATCGTCGTCGTTGTCATTGTCATTAAAATCATTTGATCTCAATATTTGTTATAATATTTCAATGCTCTTTCTAGTTGACTGCAATTTACTAGATGAACACCTTGCCTTGATTCCCAAGCTTTTCCCCTTGCTGGAATATTTGTCTCTAAAAGAAAATCCGTTTGAAGTTATTCCAGAGTGCTTCCGAGCATTCCAACATCTAAAGATCCTGTATTTGGATGAGTGTAGGAAGCTTCAAGAATTTCCAAATATCCTTCCAGATATGCCCAAATTGACAACGATAAGTACTAAGAATTGCGTGGTATTGAGCCCACAGTCTGTGGCTTTCTTTTTGAAGGAAATGGTAAAGAGATATTACAGTACTTCATATCAATTTCAACGGATATATTCCAGTTCAGTCGGGCCAACTACTTACCTATCTGTGGGTCGTCATTTTGGTTATATTCTACTTCCAGGATGCAGAATCCCTGAATGGTTTCATCATCGTTCAGAGGGGAAGTCAATATCCTTTTATGCGCGTGGAAATTACTTCCCACATTTTCTTTTATGTATTTGTTTTGATGTAAATAATGATAAACAGCGCTTGGAATTTAATGACAACTTTCCTGAATGTGGAAATTACTTCCCACATTGGAACTATGACTTTCATGTAACAGAAAACTGGGATACTGCTGATTGGAATCATGTGGAGGTTTGTTTATACTTTAAAGGCACGTCAACATCATTGGCGATAAAGCAATATGGTATTCACTTCAACGAAGAAACCTGTATGGAAGATATTCGCTTCTCATATCCTTCAGCTACACTCATTCCTTGA 2265 0.3898 MPDWFGHGSRILITTRDKHLLTAHNVSSIYEVDLLNKVQAMELFSWHAFGRRQPDPTYQDISKRVVNYAECLPLALEVVGRAFKGRSLEDCEDALDKYRSIPEGDIISKLKISYDDLDDFERKIFLDIACFFKGEDYEYVRRILEASDLNPTIGLKKLIERGLLTKSYHTVQMHCLIQEMGREIVRRESPSNVGERSRLWRQDDIIQVLADDIGTNAVEGIVLDVSYESELEEIEWNGEGFKKMKNLRILIIRNACFSTAPTYLPNSLRVLHWKNYPSSFFPPPGFHPRKLVVLKVPQSHLTLTEKPFKRLEALTKMDFSFCDFITKVPDLSGVPNLEGLELCGCPNLVEIHDSVGSLGKLVVLIASRCCELTTLPQALKLRKLKTLYLEGCRKLRRFPDIQEPMENLEYLRLDGSIEAVPSSIKYMTILTSFILENCKRLEFVPHTIAQMQSLNFLYFYDCPLIGNALSSWVESTEEDCSTSSSSLSLSLKSFDLNICYNISMLFLVDCNLLDEHLALIPKLFPLLEYLSLKENPFEVIPECFRAFQHLKILYLDECRKLQEFPNILPDMPKLTTISTKNCVVLSPQSVAFFLKEMVKRYYSTSYQFQRIYSSSVGPTTYLSVGRHFGYILLPGCRIPEWFHHRSEGKSISFYARGNYFPHFLLCICFDVNNDKQRLEFNDNFPECGNYFPHWNYDFHVTENWDTADWNHVEVCLYFKGTSTSLAIKQYGIHFNEETCMEDIRFSYPSATLIP* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01198 754 Gene3D - 34 118 IPR042197 -
Pte5g01198 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 128 IPR027417 -
Pte5g01198 754 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 381 581 IPR044974 GO:0006952
Pte5g01198 754 Gene3D Ribonuclease Inhibitor 215 497 IPR032675 -
Pte5g01198 754 Pfam C-JID domain 633 733 IPR045344 -
Pte5g01198 754 Gene3D Ribonuclease Inhibitor 498 623 IPR032675 -
Pte5g01198 754 SUPERFAMILY L domain-like 173 606 - -
Pte5g01198 754 Pfam NB-ARC domain 7 87 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01198 Pte-Chr5 33597175 33600000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01198 3 462 WRKY Transcription Factor Family AT4G12020 34.519 4.56e-61 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01198 - - qsa:O6P43_008369 486.493