Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01194 ATGCACATGCTTGTACCCACACACATACTTGCAATCCTCCTGGCCCTGATAATTCGCATACTCACACTTGTTTTCACGTGCATACTAAGATTGTGTCTACATCTGCTGAAGACAAAGTTCCAACGGATGATACTGCTGAGTCATCAGAAAAGAAGTCAAGAGAAACGCCCCTCAGGTAACCGTGAAGCAGTCAGGAAGTATCGTGAGAAGAAGAAAGCCCGAGCTGCATCATTGGAGGATGAAGTCGTTAAGTTGAGAGCATTGAATCAGCATTTGTTGAAAAGGTTGCAGGGACAAGCTGCACTGGAGGCTGAAGCCTCCAGACTTAAGTGCTTGCTGGTCGACATTCGTGGAAGGATTGATGGGGAGATTGGAAGATTCCCATATCAGAAATCAGTTACTCCAGCCATGACAAATCCAAGTTTACCTGAATCTTATGTGATTAATCCGTGCAGTATGCAATGCAATGAAAAAGTCTATTGTCTTCATCCAGCAGGAGATGGGAAGACTACAGAAGATGCATCCTTAAATGCACAAGAATTTAGTGGCTGTGAATTTGAAAGTCTTCAGTGTCTGCCAAATCAATATTATGGGCTGAAGGATGTTCCTGGTTGTGGTCCTGGATAG 627 0.4402 MHMLVPTHILAILLALIIRILTLVFTCILRLCLHLLKTKFQRMILLSHQKRSQEKRPSGNREAVRKYREKKKARAASLEDEVVKLRALNQHLLKRLQGQAALEAEASRLKCLLVDIRGRIDGEIGRFPYQKSVTPAMTNPSLPESYVINPCSMQCNEKVYCLHPAGDGKTTEDASLNAQEFSGCEFESLQCLPNQYYGLKDVPGCGPG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01194 208 Pfam Basic region leucine zipper 52 105 IPR004827 GO:0003700|GO:0006355
Pte5g01194 208 Gene3D - 46 116 - -
Pte5g01194 208 PANTHER CCAAT/ENHANCER BINDING PROTEIN 47 128 IPR031106 GO:0003700|GO:0006351
Pte5g01194 208 CDD bZIP 53 97 - -
Pte5g01194 208 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 50 97 IPR004827 GO:0003700|GO:0006355
Pte5g01194 208 SMART brlzneu 46 115 IPR004827 GO:0003700|GO:0006355
Pte5g01194 208 Coils Coil 61 95 - -
Pte5g01194 208 SUPERFAMILY Leucine zipper domain 54 97 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01194 Pte-Chr5 33567461 33568087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01194 32 208 bZIP Transcription Factor Family AT2G16770 58.659 3.93e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte5g01194 bZIP_2 7.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01194 K25785 - qsa:O6P43_002124 241.506