Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01189 ATGGCAAGATGTATGTCAGGAACTTGTTACTTCTGGTGCTTCTACTGCTCAATCTTTGCCATTGTTATGGGTGGTATATTCTATACTATCATCTTCCTCATCATCTTCCACCCCAGCAATGTTAAGTTCTATGTGACTAATGCATCAGTAACCACGTTCAATTTCACCAACAACAGCACCCTTTACTTTGACCTAGCTATGAACATCACAGTCAGAAATCCCAACAACAGGATTGCTGTAGATTACAGACGGGTAACAGTGATAGGGTATTACAAAGATAATTCATTTGGAGCTGTGAATTTGTCACCCTTTACCCAAGGACATAAGAACACCACCTATCTGAACTCTGTATTATCTGGGCAGCAAGGTCTGTTGCTCGATGACAAGTACATTGCTGAGTACTACACTGAGACAGCTGCTAGGACATACCTTATTAATGTAGATATTGATCTGGAGATTAGAGCAAGGTATGGTAAACTAAAATACAGTATGACTCCTCCAATAATAAGCTGTCGTCTGAAGATTCCTGTTGTAAGCTCTGCTGGTAAGCAAGCAAGTAGTTTTACTTTCACCAAATGCCGGAACACAGGAGCATTCTTCACTAGCCGTTATAACGACGATGACTAA 627 0.4067 MARCMSGTCYFWCFYCSIFAIVMGGIFYTIIFLIIFHPSNVKFYVTNASVTTFNFTNNSTLYFDLAMNITVRNPNNRIAVDYRRVTVIGYYKDNSFGAVNLSPFTQGHKNTTYLNSVLSGQQGLLLDDKYIAEYYTETAARTYLINVDIDLEIRARYGKLKYSMTPPIISCRLKIPVVSSAGKQASSFTFTKCRNTGAFFTSRYNDDD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01189 208 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 4 178 - -
Pte5g01189 208 Pfam Late embryogenesis abundant protein 68 159 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01189 Pte-Chr5 33504514 33505140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01189 40 177 SNARE and Associated Proteins AT1G32270 30.435 2.59e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01189 - - qsa:O6P43_008466 184.882