Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01188 ATGTCATTTTCCAGCACCTGTGGTACCTGCTGCTGCTGCATTATATGCTTGCTGTTTTCTTTTGGGGGTGTACTCTACACCATCATCTTCCTAAGCATCTTCCATCCCCATAGTGTTAAGTTCTATGTAACCGATGCCACTGTCTCCAGGTTCAACTTCACAAACAACAGCACCCTCTATTATAACTTGGCTCTCAACATCACAGTGAGAAACCCCAACAACAGGATAGCTGTGGATTACAGACGCGTGACAGCAATTGCTTATTACAAAGACAGTTCATTCGGAGCTGTGAATTTGTCGCCCTTTAGACAAGGGCACAAGAATACTACCTATCTGAATGCTTCCTTTCAAGGGCAGCAAGGTCTATGGCTCAAAGAGAAGTACCTAGCTGAGTATTACTCCGAGAGTAAAGCTGGGGCTTACCTTATTAACGTGGATCTTGATCTTGAGATCAGAGCAAGGTATGGTCGCCTGAAATATAGTATGTCACCACCCATAATAACCTGTCGTATGAATATCCCAGTTGTCAATGCTACTGATGGAAAACAAGCTAGCAGTTTCAGCTTCACCTCCACCAAATGTAAGAACACTGGAGCATTCTTCACTGATCGTTATAACACTGACTAG 627 0.437 MSFSSTCGTCCCCIICLLFSFGGVLYTIIFLSIFHPHSVKFYVTDATVSRFNFTNNSTLYYNLALNITVRNPNNRIAVDYRRVTAIAYYKDSSFGAVNLSPFRQGHKNTTYLNASFQGQQGLWLKEKYLAEYYSESKAGAYLINVDLDLEIRARYGRLKYSMSPPIITCRMNIPVVNATDGKQASSFSFTSTKCKNTGAFFTDRYNTD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01188 208 Pfam Late embryogenesis abundant protein 66 155 IPR004864 -
Pte5g01188 208 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01188 Pte-Chr5 33501311 33502384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01188 39 208 SNARE and Associated Proteins AT1G32270 32.184 5.99e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01188 - - gmx:100783747 194.512