Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01186 ATGCCTCTAATCCACAGCTCTTGTTGTTATGCGAATTTCAACAATCTTATCTCAACTTTTAATCCATTTCTCAACTGCCCTGTTCGTCCCAATCTCATTGGGAAACCTTCTCGTATTGTCATTATAAGAGCGGCTGGAACTGATTACTATTCGACTCTGAATGTGAGCAGGAATGCAACTTTACAGGAAATCAAGAGTGCGTATAAGAAACTTGCTCGTCAGTATCATCCTGATGTAAGCAAGAAATCTGGTGGGGAAGAGAAGTTCAAAGAGATCAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGAGCTTTATATGATCGCTTTGGTGAGGCAGGTTTAAAGGGAGAAAATGGAGGGACAGGTAGAGCCTCGGGGGTGGATCCTTTTGAAGTATTTGAAGAATACTTTGGTGGTTCTGATGGATTTTTTGGGGGACAGGACCTAGGAGGCATGAAGTTCAATTTTAGGAATAAGAGAAATCATGATCTTGATGTTCGGTGTGATCTTTACTTGTCATTTGAAGAGTCAATTTTTGGTGGAGACAAGGAAATTGAAGTTTCCTATTTTGAGACATGTCAAAGTTGTGACGGGACAGGAGCTAAATCAAATTCTTGCATTAGATCATGTACAAATTGTGGTGGCAGGGGAAGGGAGATGAAAAGTCAAAGAACTCCATTTGGAATCATGACACAGGTTTCAACTTGCTCCAAGTGTGGGGGTATTGGCGATATAGTTACAGATCACTGTCCAAGTTGTGTGGGCAGGGGGCTGATGCAGTGTAAAAGAAAAATGGAGGTGGCCATCCCTCCTGGAGTCACTGATGGAGCCACAATGCAAATTCAAGGGGAAGGGAGTCTTGATAAGAAAAGAGGTAGAGCTGGTGATCTGTACATAGCCCTCCATGTAGCTGAAAAGCATGGTATTAGGAGAGAGGGTCTAAATCTGTACTCCAAGGTTGATGTTGACTTCACAGAGGCAATTCTAGGAACCACTGCAAAGGTGGAAACTGTCGAAGGCTTGAGAGAGATTCAAATTCCTCCCGGGACTCAGACTGGGGATTCAGTAAAGTTGTCTCATATGGGTGTTCCAGACATGAACAAACCTTCTGCTCGAGGTGACCATCACTTCATTGTGAATGTTCATATCCCTAAAAGTATCAGTAAAGCAGAACGTGTACTTGTAGAGAAATTGGCTTCGATAAGAGCTTCTAATAAAGATTATTCAGAAGCAACAGCTGGAACATCCAGAACTGGGGAGACCCAAACTTTAGGTCCCAAAGAACGTGCTGCAGTACTTTGGAGCTCGATAGAAAATTTCCTGCGGGGGAAAAGGTCTCGAGGGGGCTTTGCATCTATTATGTTGGACACTACATCCTCGTCGACATCATCATCATGGAGATTTAGCCAACTCAATTCATCAATGGCAGATTCCTTTTTCACTATATGTGCTATTGTTTGTATCTGTATGTTGATGGGAAAGACTGTCTACTTCAGATTATTACAACTGAGAATCCACTCCCCTCTCACTGAAAGAACACAAGGAGAGAATAACTGA 1563 0.4261 MPLIHSSCCYANFNNLISTFNPFLNCPVRPNLIGKPSRIVIIRAAGTDYYSTLNVSRNATLQEIKSAYKKLARQYHPDVSKKSGGEEKFKEISAAYEVLSDDEKRALYDRFGEAGLKGENGGTGRASGVDPFEVFEEYFGGSDGFFGGQDLGGMKFNFRNKRNHDLDVRCDLYLSFEESIFGGDKEIEVSYFETCQSCDGTGAKSNSCIRSCTNCGGRGREMKSQRTPFGIMTQVSTCSKCGGIGDIVTDHCPSCVGRGLMQCKRKMEVAIPPGVTDGATMQIQGEGSLDKKRGRAGDLYIALHVAEKHGIRREGLNLYSKVDVDFTEAILGTTAKVETVEGLREIQIPPGTQTGDSVKLSHMGVPDMNKPSARGDHHFIVNVHIPKSISKAERVLVEKLASIRASNKDYSEATAGTSRTGETQTLGPKERAAVLWSSIENFLRGKRSRGGFASIMLDTTSSSTSSSWRFSQLNSSMADSFFTICAIVCICMLMGKTVYFRLLQLRIHSPLTERTQGENN* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01186 520 SMART dnaj_3 47 104 IPR001623 -
Pte5g01186 520 CDD DnaJ_zf 195 259 IPR001305 GO:0031072|GO:0051082
Pte5g01186 520 ProSiteProfiles dnaJ domain profile. 48 112 IPR001623 -
Pte5g01186 520 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 305 IPR008971 GO:0006457|GO:0051082
Pte5g01186 520 ProSiteProfiles Zinc finger CR-type profile. 182 264 IPR001305 GO:0031072|GO:0051082
Pte5g01186 520 Gene3D DnaJ domain 45 149 IPR036869 -
Pte5g01186 520 SUPERFAMILY HSP40/DnaJ peptide-binding domain 312 394 IPR008971 GO:0006457|GO:0051082
Pte5g01186 520 ProSitePatterns Nt-dnaJ domain signature. 89 108 IPR018253 -
Pte5g01186 520 Gene3D - 307 416 - -
Pte5g01186 520 FunFam Chaperone protein dnaJ 1, mitochondrial 306 414 - -
Pte5g01186 520 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 24 405 - -
Pte5g01186 520 Gene3D - 167 301 - -
Pte5g01186 520 FunFam Chaperone protein dnaJ A6 chloroplastic 45 151 - -
Pte5g01186 520 Pfam DnaJ C terminal domain 169 386 IPR002939 -
Pte5g01186 520 CDD DnaJ_C 167 389 - -
Pte5g01186 520 FunFam Molecular chaperone DnaJ 187 264 - -
Pte5g01186 520 CDD DnaJ 48 101 IPR001623 -
Pte5g01186 520 Pfam DnaJ domain 48 109 IPR001623 -
Pte5g01186 520 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 182 261 IPR036410 -
Pte5g01186 520 SUPERFAMILY Chaperone J-domain 43 153 IPR036869 -
Pte5g01186 520 NCBIfam molecular chaperone DnaJ 48 402 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte5g01186 520 Pfam DnaJ central domain 195 259 IPR001305 GO:0031072|GO:0051082
Pte5g01186 520 Hamap Chaperone protein DnaJ [dnaJ]. 45 449 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte5g01186 520 Gene3D - 195 259 - -
Pte5g01186 520 PRINTS DnaJ domain signature 68 83 IPR001623 -
Pte5g01186 520 PRINTS DnaJ domain signature 50 68 IPR001623 -
Pte5g01186 520 PRINTS DnaJ domain signature 104 123 IPR001623 -
Pte5g01186 520 PRINTS DnaJ domain signature 84 104 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01186 Pte-Chr5 33448299 33457075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01186 49 109 C2H2 Transcription Factor Family AT1G74250 41.791 3.57e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01186 K03686 - zju:107435129 583.563