Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01185 ATGCAACTTCAAAATCCAGTCATTTTGGTTAACCTGTTCCTCATTTTGCTTCCTTTAGCCAAAACAGATCTGGGTTCTGAGCGAGCTGCTCTCTTGTTTCTCAGGGCTGCAGTTGGGGGCCGAACACTTCTTTGGAATGTAACACAACAAAGTCCATGTAACTGGGCTGGTGTTCAATGTGAAGACAACCATATCACTGTGCTTCGTCTTCCTGGTGTAGCACTTACTGGCCAAATACCACATGGCATTTTCGGCAACCTCACTCATCTACGCACTCTCAGTCTGCGTCTCAATGCCTTAACTGGCCAGCTTCCTTCAGATCTTGCTTCCTGTCTTAAACTTCGTAACCTTTACTTGCAAGGGAACTTGTTGAATGAGGAAATCCCAGATTTTTTGTTTACGCTGCGTGACTTGGTTCGGCTAAACTTGGCTTCAAACAATTTTTCTGGTACTATCTCACCAGATTTCAACAAATTGACTAGGTTGAGAACTCTGTTTTTGGAAAACAACTATCTCTCAGGCTCAATCCCTCATTTGAATCTCAATGATCTTCAGCAGTTCAATTTGTCCAACAATTTGCTAGAGGGTTCAGTTCCAGACAAGTTGAATAAGTTTTCCGTGGATTCATTTTTGGGAAATTCGCTGTGTGGGAAACCCCTTAAGCTATGTCCTGGGATTGGAATTGCACCCTCAAGTGATATTTCAATCGATGCGACAAAGAAGAAGTTGTCAGGTGGAGCTATTGCTGGTATTATAATTGGATCTGTGGTGTTTTTGTTGTTGATTCTTTTGTTATTGGTGTTTTTGTGTCGGAAGAGGAGCAGCCAGAAAACAAGCTCTGTTGATATTGCAACTGTGAAGCATGCTGAATTGGAAATCCCTGTTGAGAAACCAGTGTCCGAAGTGGAGAATGGTGAGTACAATAGTGGGTATTCTGTGGCATCAGCAGTTGAAGCAGCAATGGTTGGCAGTGGCAAGGCTGAAACTAACAATGGAGGAGCAAAAAAGTTGGTATTTTTTGGTAATAATTCAAGCAGAGTTTTTGATTTGGAGGATTTATTGAGAGCATCTGCGGAGGTTTTGGGAAAAGGAACTTTTGGAACAGCATACAAGGCTGTTTTGGAAGTTGGGGCTGTGGTGGCTGTGAAAAGATTAAAAGACGTGACAATTTCAGAGAAGGAATTCAAGCAGAAGATTGAAACTGTTGGAGCAATGGACCATAAAAATTTAGTCCCTCTCAGGGCTTATTATTTCAGTAGGGACGAGAAGCTCCTTGTTTATGATTACATGCCAATGGGAAGCTTATCTGCACTTCTGCATGGAAGCAAAGGGGCAGGCAGGACACCGTTGAATTGGGAAATGAGATCAGGCATTGCTCTTGGAGCTGCTCGTGGCATTGAGTATATTCACGCTCAAGGTCCCAATGTTTCTCATGGAAACATAAAATCATCTAACATTCTTCTAACAAAATCATATGAGGCCCGTGTATCTGATTTTGGTCTAGCACTTCTTGTTGGACTCTCATCCACTCCTACCAGAGTTGTTGGTTACCGTGCTCCTGAGGTTACTGATCCTCGCAAAGTATCCCAAAAGGCTGATGTCTATAGCTTTGGGGTATTGCTTTTGGAACTTCTAACCGGAAAGGCTCCTACTCATTCCCTCTTGAATGAGGAAGGGATTGACCTTCCCAGGTGGGTACAGTCCATTGTCAGAGAAGAGTGGACTTCTGAAGTTTTTGATCTTGAGCTCCTCAGGTATCAAAATGTTGAGGAGGAAATGGTTCAACTTCTGCAACTTGCAGTAGATTGTGCTGCACCTTATCCGGATAACCGCCCATCCATGTCTGAAGTTATCAAGCGAATTGAAGAGCTACGACAGTCCAGCTTGAAAGACGATCATCTCCCACAACCTGATGTTATTCAGGATGGTTATGTTGTATCTTCATGGTGA 1950 0.4313 MQLQNPVILVNLFLILLPLAKTDLGSERAALLFLRAAVGGRTLLWNVTQQSPCNWAGVQCEDNHITVLRLPGVALTGQIPHGIFGNLTHLRTLSLRLNALTGQLPSDLASCLKLRNLYLQGNLLNEEIPDFLFTLRDLVRLNLASNNFSGTISPDFNKLTRLRTLFLENNYLSGSIPHLNLNDLQQFNLSNNLLEGSVPDKLNKFSVDSFLGNSLCGKPLKLCPGIGIAPSSDISIDATKKKLSGGAIAGIIIGSVVFLLLILLLLVFLCRKRSSQKTSSVDIATVKHAELEIPVEKPVSEVENGEYNSGYSVASAVEAAMVGSGKAETNNGGAKKLVFFGNNSSRVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGAVVAVKRLKDVTISEKEFKQKIETVGAMDHKNLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGSKGAGRTPLNWEMRSGIALGAARGIEYIHAQGPNVSHGNIKSSNILLTKSYEARVSDFGLALLVGLSSTPTRVVGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGIDLPRWVQSIVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVIKRIEELRQSSLKDDHLPQPDVIQDGYVVSSW* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01185 649 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Pte5g01185 649 Gene3D Transferase(Phosphotransferase) domain 1 430 640 - -
Pte5g01185 649 CDD STKc_IRAK 361 624 - -
Pte5g01185 649 Gene3D Phosphorylase Kinase; domain 1 322 429 - -
Pte5g01185 649 Pfam Leucine rich repeat 67 124 IPR001611 GO:0005515
Pte5g01185 649 SUPERFAMILY Protein kinase-like (PK-like) 359 631 IPR011009 -
Pte5g01185 649 SUPERFAMILY L domain-like 45 205 - -
Pte5g01185 649 Gene3D Ribonuclease Inhibitor 132 219 IPR032675 -
Pte5g01185 649 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Pte5g01185 649 FunFam pollen receptor-like kinase 1 323 429 - -
Pte5g01185 649 Gene3D Ribonuclease Inhibitor 28 131 IPR032675 -
Pte5g01185 649 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Pte5g01185 649 Pfam Protein kinase domain 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01185 649 PANTHER OS05G0588300 PROTEIN 10 627 - -
Pte5g01185 649 ProSiteProfiles Protein kinase domain profile. 355 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01185 649 FunFam Probable inactive receptor kinase At1g48480 430 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01185 Pte-Chr5 33424756 33427508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01185 23 631 Receptor kinase-like Gene Family AT1G48480 65.120 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01185 Pkinase 4.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01185 - - qsa:O6P43_008468 968.378