Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01184 ATGGCGCCGGTAGGTGCTCACGGCTCAAATTCTTATCGCACCAAAGGCTTCAAATTTGAATTTGATGTGTTCATAAGTTTCAGAGGAGAAGATACCCGCTATGGGTTTACTGGATATCTATACGATGCTTTGATTAGAGAAAAAATCAAAACTTTCATGGATGATGAGGGTCTTAGAAGGGGTGATGAAATCTCACCTGCTCTAGTCAAAGCCATTGAAAGATCAAGGATGTCAGTCATTGTGTTTTCTGAAGATTATGCTTCTTCCAGATGGTGTCTTGATGAGCTTGCCATGATTTTTGAGTGTATGAAGCTGAGAGGACAGTTGGCTCTGCCTGTGTTTTACAAAGTCGATCCTTCTATGATACGGCATCAGAGCGATTCATATGGAAAATCCTTGGCTGAACTTGAACAAAGGTTTAGAGATAACCCGGACAAAACCAAGAATTGGAGGTCAGTTTTGCGACAAGCCGCTAACTTGCCTGGATGGCATGTCGAATCTGGATATGAATTTCAGTTTATTCAGAGAATAGTTAAAGATGTGTCTAGAAGACTGAATGGCCCTAGTTTGCCTGTTGCTACTAATCCTGTTGGACGCGAGTTTCACACATCTCAAGTAGCTTCTCAGTTAGCACTTCTGTTGGACAATGGTTTTGGCTTGACAGGAGTCTGTGAAAAGAAAAATGGTGAACGCAGTATCAAGGCTGATGGTATCAGAAAATATGCAGATGATTTTGTGTTCTTTGGTTCAAGTGGACTGTTTGATTTTGAAGGCCTGGTGAGAGCTTCAGCTGAGGTTTTGGGTAAGGGAACTTTTGCAACAACATTTAAGGCTGTTTTGGAGACTGGGGTAGTGGTGGCTGTCAAAGAATTAACGGATGTGAAACTTTGTAAGAGAGAATTCCAGGAGAGAATTGAAATCTTTCGAGCAATGGACCATGAAAATTTGGTCCCGCTAAGGGCTTACTATCATTCTGGCTCTGAGAAATTCCTTGTTTATGATTACATGCCAATGGGAAGCTTATCTGCACTTTTCCATGGAAAGAAAGGAACGGGAACTACACCATTGAATTGGGAAAGGAGGTTACAGATTGCACTTGGAGTTGCTCGTGGAATCAAGTACCTTCACTCTCACGGTCCCAATATTTCTCATGGAAACATAAAATCATCGAACATCCTCCTCACAAAGTCATATGAGGCCCAGTTATCTGATTTTTGTCTACCACTCCTTGTTGGTCCTTCATCAGCTCTTGCATCTGTGCCTGGATACCATGCTCCTGAGGTTGTGGATCCTCGAAAAGTATCACAAAAGGCTGATGTCTATAGTTTTGGGGTATTACTTTTGGAAATTTTAACTGGCAAGGTTCCTATTGATTCCCTTTTAACTGAAGAAGGATTTAACCTTCCCAGCTGGGTACAGTCTATTGATGAGGAAGATTGGACTTCTGAAGTTTTTGATCTTGAGCTCCGTAGATGTCAGGATGCTCAAGAGGATATGAATCAACTTCTAAAACTTGCTGTAAAATGTACGGCCCCTTGTCCTGATAAACGGCCATCAATATCCACAGTGACCAAGTGCATTGAGGACCTGCAACGATTCACTGTGCAAAATGATTCAAGTGGTTTTCGTGGGAAGAAACCAGTCTATGACGTGGAGAATGGTGCAATGAGGCAATATGTAAAGGAAGCAGCTATAGAGATAAAAACAAAGGATTTGGTGTTTTTCGGTAATCCGAGTAGGATGTTTAATGTTGAGGGTTTGATGAAAGCTTCGGAGGTTTTAGGTCAGGGAACTTTTGGGACAGCATACAAGGCTGTTTTGGAGAATGGGATGGTGGTGACTGTCAAAGACTTAAAGGAGGTGAAAATTTTGAGGAGGGAACTCCAGAAGAGAATTGAAACTGTTGGAGCAATGGTGCATGATAATTTGGTCCCTCTTAGGGCTTATGATTCCCGTTGGGGAAAGCTCCTCCTTGTTTATGATTACATGCCAATGGGAAGCTTATCTGCGCATTTGCGTGGAAGCCAAAACAGAACACCGTTGAACTGGGAAATGAGATTAAGCATTGCCCTTGGCGCTGCACGAGGCATGGATTACCTTCACTCTCAAGGTCCTGATGTATCCCATGGAAACATAAAATCATCTAACGTCCTTCTGACAAAATTATACGAGGCCCGCATATCTGATTATTGTCTAGCTATGCTTTTTGGCCCCTCCTCCACTCCTACCAGAGTTGCTGCCTACTATGCTCCTGAGGTTGTTGATCCTCTCAAAGTATCGCAAAAGGCTGACGTCTACAGCTTTGGGGTGTTGCTTTTGGAGCTCCTAACTGGAAAATCTCCTGTTGATCCCTTCATAAACATGGAAAGAATTTACCTTCACCAATTGGTGAAGAACATCGACAGAGAAAAGTGGGCTGCTGATATTTTTGATTATGAGCTCCTCAGGAATCAGAATGTTGAGGAGCAAATGTTTGAGCTCCTGCAACTTGCGGTAGATTGTTCAGAACCATATCCTGATAAGCGTCCGACAATGTCTGAGGTTGCTATGCGCATTGAGCAGCTTGCAGTGTAG 2574 0.4281 MAPVGAHGSNSYRTKGFKFEFDVFISFRGEDTRYGFTGYLYDALIREKIKTFMDDEGLRRGDEISPALVKAIERSRMSVIVFSEDYASSRWCLDELAMIFECMKLRGQLALPVFYKVDPSMIRHQSDSYGKSLAELEQRFRDNPDKTKNWRSVLRQAANLPGWHVESGYEFQFIQRIVKDVSRRLNGPSLPVATNPVGREFHTSQVASQLALLLDNGFGLTGVCEKKNGERSIKADGIRKYADDFVFFGSSGLFDFEGLVRASAEVLGKGTFATTFKAVLETGVVVAVKELTDVKLCKREFQERIEIFRAMDHENLVPLRAYYHSGSEKFLVYDYMPMGSLSALFHGKKGTGTTPLNWERRLQIALGVARGIKYLHSHGPNISHGNIKSSNILLTKSYEAQLSDFCLPLLVGPSSALASVPGYHAPEVVDPRKVSQKADVYSFGVLLLEILTGKVPIDSLLTEEGFNLPSWVQSIDEEDWTSEVFDLELRRCQDAQEDMNQLLKLAVKCTAPCPDKRPSISTVTKCIEDLQRFTVQNDSSGFRGKKPVYDVENGAMRQYVKEAAIEIKTKDLVFFGNPSRMFNVEGLMKASEVLGQGTFGTAYKAVLENGMVVTVKDLKEVKILRRELQKRIETVGAMVHDNLVPLRAYDSRWGKLLLVYDYMPMGSLSAHLRGSQNRTPLNWEMRLSIALGAARGMDYLHSQGPDVSHGNIKSSNVLLTKLYEARISDYCLAMLFGPSSTPTRVAAYYAPEVVDPLKVSQKADVYSFGVLLLELLTGKSPVDPFINMERIYLHQLVKNIDREKWAADIFDYELLRNQNVEEQMFELLQLAVDCSEPYPDKRPTMSEVAMRIEQLAV* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01184 857 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 663 857 - -
Pte5g01184 857 Pfam TIR domain 21 186 IPR000157 GO:0007165
Pte5g01184 857 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 163 IPR035897 -
Pte5g01184 857 Gene3D Transferase(Phosphotransferase) domain 1 336 548 - -
Pte5g01184 857 Gene3D Transferase(Phosphotransferase) domain 1 663 857 - -
Pte5g01184 857 Gene3D Phosphorylase Kinase; domain 1 261 335 - -
Pte5g01184 857 Gene3D Phosphorylase Kinase; domain 1 557 662 - -
Pte5g01184 857 SUPERFAMILY Protein kinase-like (PK-like) 591 852 IPR011009 -
Pte5g01184 857 Pfam Protein tyrosine and serine/threonine kinase 589 850 IPR001245 GO:0004672|GO:0006468
Pte5g01184 857 Gene3D - 17 191 IPR035897 -
Pte5g01184 857 SMART till_3 20 160 IPR000157 GO:0007165
Pte5g01184 857 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Pte5g01184 857 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 187 - -
Pte5g01184 857 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 240 533 IPR046959 -
Pte5g01184 857 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 336 540 - -
Pte5g01184 857 Pfam Protein kinase domain 264 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01184 857 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Pte5g01184 857 ProSiteProfiles Protein kinase domain profile. 588 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01184 857 ProSiteProfiles Protein kinase domain profile. 261 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01184 857 SUPERFAMILY Protein kinase-like (PK-like) 265 526 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01184 Pte-Chr5 33407849 33412108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01184 551 855 Receptor kinase-like Gene Family AT3G17840 55.763 3.80e-105 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01184 PK_Tyr_Ser-Thr 9.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01184 - - oeu:111396454 441.425