Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte5g01148 | ATGTCCATTATGTACATTACTATTTTTCCTGGGGATGCAGTGATCAGCCAAGTTTGGAAATATGATGCTCATGCTACCTTTTATGGTGACATGAAGGGTAACGAGACGATGCATGGAGCTTGCGGTTACGAAGATTTGTTCAAGCAAGGCTATGGACTTGAAACAGCAGCATTAAGCACTGATCTTTTTAAAAACGGATCGACGTGCGGTGCTTGTTTTGAAATAATGTGTGTGCACTCGAAGTGGTGCAAGCCAAGCGCTGCTCCAATCCATGTTACAACCACCAATTTCTGTCCTCCAAACTATACCAAAACACATGATATTTGGTGCAACCCACCTCAAAAGCATTTTGATCTTTCCCTGCCAATGTTTCTCAAAATTGCAGAATACAAAGCTGGGGGTTGTACCTGTTTCATTTTGAAGAGTGAGGTGTTTCAAGCGTGGTGGGATCCAATTTGA | 459 | 0.4248 | MSIMYITIFPGDAVISQVWKYDAHATFYGDMKGNETMHGACGYEDLFKQGYGLETAALSTDLFKNGSTCGACFEIMCVHSKWCKPSAAPIHVTTTNFCPPNYTKTHDIWCNPPQKHFDLSLPMFLKIAEYKAGGCTCFILKSEVFQAWWDPI* | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte5g01148 | 152 | PRINTS | Expansin signature | 124 | 137 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | PRINTS | Expansin signature | 76 | 87 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | PRINTS | Expansin signature | 50 | 64 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | PRINTS | Expansin signature | 90 | 100 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | PRINTS | Expansin signature | 107 | 124 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | CDD | DPBB_EXPA_N | 19 | 133 | - | - | |
Pte5g01148 | 152 | Gene3D | - | 12 | 137 | IPR036908 | - | |
Pte5g01148 | 152 | SUPERFAMILY | Barwin-like endoglucanases | 16 | 134 | IPR036908 | - | |
Pte5g01148 | 152 | Pfam | Lytic transglycolase | 55 | 133 | IPR009009 | - | |
Pte5g01148 | 152 | PRINTS | Expansin/Lol pI family signature | 19 | 34 | IPR007118 | GO:0005576 | |
Pte5g01148 | 152 | PRINTS | Expansin/Lol pI family signature | 37 | 55 | IPR007118 | GO:0005576 | |
Pte5g01148 | 152 | PRINTS | Expansin/Lol pI family signature | 59 | 77 | IPR007118 | GO:0005576 | |
Pte5g01148 | 152 | SMART | dpbb_1 | 55 | 139 | IPR007112 | - | |
Pte5g01148 | 152 | PANTHER | EXPANSIN-A15 | 19 | 134 | IPR002963 | GO:0009664 | |
Pte5g01148 | 152 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 38 | 152 | IPR007112 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte5g01148 | Pte-Chr5 | 32989853 | 32990561 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte5g01148 | 21 | 133 | Expansin Gene Family | AT5G39300 | 73.684 | 7.05e-58 | 179 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte5g01148 | - | - | pvy:116115632 | 202.216 |