Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01147 ATGCAATGTCTTTTTACCAAGAGGCGAAATATGGAAGAACACTCTTTGCTCTTTGAAGATGCGTTAGATAAATATAGAAGCATCCCTGAAGGAGATATCATTAGCAAACTAAAAATAAGCTATGATGATTTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATGTTTCTTCAAGGGAGAGGATTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTATTGAGAGAGGACTTTTAACGAAGAGCGACCATAAGGTTCAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAGTTCGAAGGGAATCACCATCCAATGTTGGGGAACGTAGCAGATTGTGGCGTCAGGATGATATTATTCAAGTGTTAGCTGATGATATTGGAACGAATGCAGTAGAGGGTATCGTGTTGGGCTTGCCTTATGAGTCTGAATTGGAGGAGATAGAATGGAATGGCGAGGGTTTTAAAAAGATGAAGAATTTGAGAATACTCATAATAAGGAATGCATGTTTTTCTACTGCGCCAACTTATCTACCTAACAGTTTGAGAGTTCTTCATTGGAAGAACTATCCTTCATCATTTTTCCCACCACCTGGCTTTCGTCCAAGGAAACTCGTCGTACTCATAGTCCCTCATAGTCATCTCACATTGACAGAAAAGCCATTCAAGGATGCAGAATCCCTGAATGGTTTCATCATCGTTCAGAGGGGAAGTCAATATCCTTTTATGCGCGTGGAAATTACTTCCCACATTTTCTTTTATGTATTTGTTTTGATGTAA 819 0.3907 MQCLFTKRRNMEEHSLLFEDALDKYRSIPEGDIISKLKISYDDLDDFERKIFLDIACFFKGEDYEYVRRILEASDLNPTIGLKKLIERGLLTKSDHKVQMHCLIQEMGREIVRRESPSNVGERSRLWRQDDIIQVLADDIGTNAVEGIVLGLPYESELEEIEWNGEGFKKMKNLRILIIRNACFSTAPTYLPNSLRVLHWKNYPSSFFPPPGFRPRKLVVLIVPHSHLTLTEKPFKDAESLNGFIIVQRGSQYPFMRVEITSHIFFYVFVLM* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01147 272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 229 IPR044974 GO:0006952
Pte5g01147 272 SUPERFAMILY "Winged helix" DNA-binding domain 32 136 IPR036390 -
Pte5g01147 272 SUPERFAMILY L domain-like 163 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01147 Pte-Chr5 32974841 32977302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01147 44 226 WRKY Transcription Factor Family AT4G12020 42.051 8.30e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01147 - - vum:124827482 217.624