Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01133 ATGAGTTCAGGGATCCAGTGGTCATTTGCAGACAAGGGCTCTCCTCTTCCTCAGTTCCTGTCCTTTAAAGCTAATCAAGATGATAGGTCAAGGAAGACATCTCTTGATGCACTAGCTTCACCTGGATTTATGACTATTTCAACTGCTGATGCTTTAAAATCCGACCAAAAATCACTTTCAGGCATAGTCCAGAAAAATTTGATGATTGATAAGCATGTTGAAAGCCGATGTGCAAGGACAGTCCATACTCTGAAGCTGTTGGATGCTCATTCTGTTCTAGCCCCAGAAGCAGGAATACATTCTTTTTATAATCAATCGAATCAGACAAGTCATATTGTCACGAGTAATCCTGTCCTCCATTCTTGCCTTGCATCAAACGGACACAATGGGGTCAACTCCACAATAAAGACACAATCACTTGGAGGGTTTCCACAGGCAGCCCCTGTATTGTCTGTTCTTCCCCTTAGAGGTCCCGTTGTGGGGACGACTGATCTAAGGAACATTTCTAAACCCTCTTCGCCACCTGCTCAGCTGACCATATTCTACGGTGGTTCGGTTTGTGTTTATGATGACATATCTCCTGAGAAGGCTCGGGCTATTATGTTACTGGCAGGGAACGGATCTTGTGCACCACCAAACAAGACCTTTTGTTCTTTGGCTCCAATGCAGCCATCCGTCTCAATGCCACTAAGGGGTGATTGCTTTATCATGAACCAACCTTGTTCATCAGCACTTCCTAGTCCTTTGCCACTGACCTGCCATTCTGGACCTCCAGCTGTGACGATTTCTACCACCATCAATGAGCCACCAAAGGAGAAACTAGTATTCTCACCAGCATCAAATGTTAACCACGTGGAGATTCCTAATGCATTCAGTTCAGTAGGAGCTGCATCTACTACAACTACTCCTTCAGGTATGACAATTGAGCGTTTCTTTCGTCTAAAAGCTCTGATCTCTGATTCAGACAACATTGTGACTATGTATTGCCAATAA 993 0.4431 MSSGIQWSFADKGSPLPQFLSFKANQDDRSRKTSLDALASPGFMTISTADALKSDQKSLSGIVQKNLMIDKHVESRCARTVHTLKLLDAHSVLAPEAGIHSFYNQSNQTSHIVTSNPVLHSCLASNGHNGVNSTIKTQSLGGFPQAAPVLSVLPLRGPVVGTTDLRNISKPSSPPAQLTIFYGGSVCVYDDISPEKARAIMLLAGNGSCAPPNKTFCSLAPMQPSVSMPLRGDCFIMNQPCSSALPSPLPLTCHSGPPAVTISTTINEPPKEKLVFSPASNVNHVEIPNAFSSVGAASTTTTPSGMTIERFFRLKALISDSDNIVTMYCQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01133 330 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 116 228 IPR040390 -
Pte5g01133 330 Pfam tify domain 173 205 IPR010399 -
Pte5g01133 330 SMART tify_2 171 206 IPR010399 -
Pte5g01133 330 ProSiteProfiles Tify domain profile. 171 206 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01133 Pte-Chr5 32732308 32735332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01133 5 211 Tify Gene Family AT3G17860 41.981 1.39e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte5g01133 tify 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01133 K13464 - qsa:O6P43_005211 242.662