Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01128 ATGGCACTTGTAAGACCCCAAGGCTCCAGCTCCACTAATTACACCAGCACCTGGAATTTTTCACATGATGTCTTCTTAAATTTCAGAGGAGAAGATACACGTTATGGATTTACTGGGAATTTATACAGTGCTTTAGTTCAAAAAGGAATCAAAACTTTCATAGATGATGAGGGTCTCAGCAAGGGTGATGGCATCTCACAAGCTCTAATCAGAGCCATTGAAGGGTCAAGGGTATCTATCGTTGTTTTTTCTCAGAACTATGCTGCTTCCGGATGGTGTCTCGATGAGCTAATCACGATTCTTGACTGCCTGGAGCTCAGAAAACAGTTGGTTGTACCTGTATTTTACAAGATCGACCCTTCTATGGTACGAAACCAAACAGGTCCTTATGACAAAGCCATGGCTAACCACAAGAAGAAAAAGAGAGATAATGAGGGGAAAGTCAACAGATGGAGGTCAGCTTTGTATCAGGCTGCAAACTTGTCAGGCTGGCATTTTGAATTCGGGTATGTAGTGAATCTACTTGAATATCAAGATCTGACTGTAGCTTTACATAGATCCACCCCTTCCAAATGCCATAATGGAAAGACTGATTTTGCAAGAAAAATTTACGCTGCATTGCAGGCCACATCCCAAGTCATTCTGCAAGGCCTTCAGTTCAAGAATAATGTTGCCAAAATGGAGTGCTCTGAGGTTGCAGCAGGTGTGACATCGTCAAATATGTCCAATGGCAAGGCAGAAGCTAGCAAAAGTACAAAGAAGTTTCTGTTCTTTGGTAATACAAGTAGGCAGTCTGAGGCTGCAGCACCATCAAAGGCGGGGAATAGCAAGGCAGGAGCTACCAGTGGTGAAGCAAAGAAGTCAACGGTTGTTGGTAAATTGATGAGTACGCCATCTAATGCAGCCGCAACATCATCATCAGGGGTGAGCAATGGCAAGGTAGAAGCTAGAAATGGCGGAGCAAAGAAATTGGTGCTCTTTGGTCAATCAAGTTGGCACTTTGATTTGGAGCAAATGTTGAGAGCTTCAGCGGAGGTTTTGGGTAAGGGAACTTTTGGGACATCATACAAGGCTGTTCTGGAGGATGGGACAGTGGTGGCTGTAAAAAGATTAAGGGATGTGACAAATCTGGAGAAGGATTTCAAGGAGAAAGTAGAAATTTTTGGAGCAATGTCCCATGAAAATTTGTTGCCTATTAGAGGTTACTATTTCTCAAAGGACGAGAAGCTCCTTTTTTATGATTACATGCCAATGGGAAGCTTATCTCAACTTTTGCATGGAAGTAGAGGGGCAGGCAGGACACCATTGAATTGGGAAACAAGATCACGCATTGCCCTTGGAGCTGCTCGTGGCATTGAGTACCTTCATGCACAAGTTCCCAATGTTTCTCATGGAAACATAAAATCATCTAGCATTCTACTAACAAAATCATATGAGGCCCGTGTATCTGATTTTGGTCAAGCAGTTCTTGTTGGACCCTCTTCCACTCCTCCCAGAGTTGCCGGCTACCGTGCTCCTGAGGTGACCGATCCTCGCAAAGTAACCCATAAGGCTGATGTCTTCAGCTTTGGGATATTGCTTTTGGAACTTCTAACCGGAAAGGCTCCTAGTCATTCCCTCTTGAATGAGGAAGGGATTGACATTCCCAGGTGGGTAAAATCCGTCGTCAGAGAAGAATGGACTATTGAAATTTTTGATATTGAGCTCCTCAGGTATCAAAATATTGAGGAGGAAATGGTTGAGCTTGTGCAACTTGGACTAGATTGCACAGCAGAAAATCATGTTAACCGGCCATCCATGTCTGAAGTTACCAAGCGGATCGAGGAGTTGACATTGTCCACCTTGAAAAGATAA 1854 0.4369 MALVRPQGSSSTNYTSTWNFSHDVFLNFRGEDTRYGFTGNLYSALVQKGIKTFIDDEGLSKGDGISQALIRAIEGSRVSIVVFSQNYAASGWCLDELITILDCLELRKQLVVPVFYKIDPSMVRNQTGPYDKAMANHKKKKRDNEGKVNRWRSALYQAANLSGWHFEFGYVVNLLEYQDLTVALHRSTPSKCHNGKTDFARKIYAALQATSQVILQGLQFKNNVAKMECSEVAAGVTSSNMSNGKAEASKSTKKFLFFGNTSRQSEAAAPSKAGNSKAGATSGEAKKSTVVGKLMSTPSNAAATSSSGVSNGKVEARNGGAKKLVLFGQSSWHFDLEQMLRASAEVLGKGTFGTSYKAVLEDGTVVAVKRLRDVTNLEKDFKEKVEIFGAMSHENLLPIRGYYFSKDEKLLFYDYMPMGSLSQLLHGSRGAGRTPLNWETRSRIALGAARGIEYLHAQVPNVSHGNIKSSSILLTKSYEARVSDFGQAVLVGPSSTPPRVAGYRAPEVTDPRKVTHKADVFSFGILLLELLTGKAPSHSLLNEEGIDIPRWVKSVVREEWTIEIFDIELLRYQNIEEEMVELVQLGLDCTAENHVNRPSMSEVTKRIEELTLSTLKR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01128 617 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Pte5g01128 617 Pfam TIR domain 22 157 IPR000157 GO:0007165
Pte5g01128 617 SUPERFAMILY Protein kinase-like (PK-like) 345 607 IPR011009 -
Pte5g01128 617 MobiDBLite consensus disorder prediction 266 283 - -
Pte5g01128 617 CDD STKc_IRAK 347 610 - -
Pte5g01128 617 SMART till_3 21 161 IPR000157 GO:0007165
Pte5g01128 617 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Pte5g01128 617 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 164 IPR035897 -
Pte5g01128 617 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01128 617 Pfam Protein kinase domain 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01128 617 MobiDBLite consensus disorder prediction 266 285 - -
Pte5g01128 617 FunFam pollen receptor-like kinase 1 310 415 - -
Pte5g01128 617 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 617 - -
Pte5g01128 617 ProSiteProfiles TIR domain profile. 20 207 IPR000157 GO:0007165
Pte5g01128 617 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 170 - -
Pte5g01128 617 PANTHER OS05G0588300 PROTEIN 242 610 - -
Pte5g01128 617 Gene3D - 20 176 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01128 Pte-Chr5 32665421 32670407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01128 311 610 Receptor kinase-like Gene Family AT1G48480 66.997 5.22e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01128 Pkinase 4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01128 - - csv:101222458 478.404