Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01127 ATGGCTGCGGCAAATTCAGAAATAATGAAGGCGGACAATATTGGCAAAGCAAAAGCTAAAAATGATAATGGCAGTGTAAGAAACTACGGGGCAAAAGCAATGTCTAAAGTGGAAAATGGTGTGTACAACAACAATTGGTATAACAACCATGTGGGTTCATCAGGAGCAGTTTCGAAGGTAAGCAATCGCAAAGTCGATAATCAAGACAAAGGAGAGGATCTTCAATTGAGCAATGCTTCCGTGAGATATATATTAAATGTGATGTTGGAGAATGGAGCCTTTGGGATGCGATACATTGTTAGATTGGAAAATGATTCGAAGGTGATGCCCGAGGTGAGAGCCGTGAAAAGATTAAAGGCAAGGCAAATTTCAAAACAGGATTTCAGGAGCGTTGTTCAACCTATTATTACAGCAATGGATCATGAAAATTTGCTCAAACTTAGGGCTTACTGTTGGAGTAAGGAGGCAAAACTTCTATTTTATGATTTCATGCCAAACCGAAGCCTATACTCACATTTGCATGAAAATGAGTGCAGCAAGAGAATAATGGATTGGCCAATGAGATTAAACATTGCTCTTGAAACTGCTCGTGGAATCGCATACATTCATCAGTGTCACAATCTTCCACATGGAAACATAAAATCATCTAACATTATCCTTACAGATTCATATTCTGCCCAGCTGTCAGAATATTGTTTAACGCCACTTGATGATCCCTCCTCAACCATGAAAGATAATGGCTACTGTGCTCCTGAAGTCACAGGTCCTCACAGAGTAACCCTCGAGAGTGATGTCTACAGCCTCGGGGTAGTGCTTATGGAACTTGTGACTGAAAAGAATCCAACAAGCTTCAAGAAGAATGAGGGTGGTCTTCCCAGATGGGTGAAGTCCATGGTTGAAAGGAACTCGATTTATCAAGTAATTCCTAATCAGTTCCACTCTCAAGATTCAATGCAAATGTGTGAGCTGTTAGAAATTGCAATTGCATGTACTGATCCAAAACCTTGTGAGCGTCCTCCAATGTCTGCAGTGACCCCGTACATCGATCAGCTCGAGCAATTCAGCATGAAAGGTTGTATCACTTCGATTTCGTGTTACACAACGGATAAAGTAGTGTTCAACTATCAGCGAGTAGAGTATGATGTCAATGGCTATCAAACAGTAAACGAGTGGACAGACGTCAAATACCAAGGGGATTTAATTAAGATATCTATATCCAGCTAA 1224 0.4069 MAAANSEIMKADNIGKAKAKNDNGSVRNYGAKAMSKVENGVYNNNWYNNHVGSSGAVSKVSNRKVDNQDKGEDLQLSNASVRYILNVMLENGAFGMRYIVRLENDSKVMPEVRAVKRLKARQISKQDFRSVVQPIITAMDHENLLKLRAYCWSKEAKLLFYDFMPNRSLYSHLHENECSKRIMDWPMRLNIALETARGIAYIHQCHNLPHGNIKSSNIILTDSYSAQLSEYCLTPLDDPSSTMKDNGYCAPEVTGPHRVTLESDVYSLGVVLMELVTEKNPTSFKKNEGGLPRWVKSMVERNSIYQVIPNQFHSQDSMQMCELLEIAIACTDPKPCERPPMSAVTPYIDQLEQFSMKGCITSISCYTTDKVVFNYQRVEYDVNGYQTVNEWTDVKYQGDLIKISISS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01127 407 Pfam Protein tyrosine and serine/threonine kinase 88 345 IPR001245 GO:0004672|GO:0006468
Pte5g01127 407 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 87 353 IPR046959 -
Pte5g01127 407 SUPERFAMILY Protein kinase-like (PK-like) 83 349 IPR011009 -
Pte5g01127 407 Gene3D Transferase(Phosphotransferase) domain 1 164 363 - -
Pte5g01127 407 ProSiteProfiles Protein kinase domain profile. 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01127 407 Gene3D Phosphorylase Kinase; domain 1 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01127 Pte-Chr5 32578142 32579994 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01127 72 355 Receptor kinase-like Gene Family AT1G48480 40.614 5.56e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01127 PK_Tyr_Ser-Thr 4.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01127 - - sly:101268851 203.756