Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01119 ATGGCGAGAGGTCAGATTTCCAGATCCACCTACGATGTGTTCTTGAGTTTCAGAGGAGAAGATACCCGGCATGGTTTTACAAAGTATCTCTACGATGCTTTGACTCAAAATAATATCAAAGTTTTCATGGACGGCAATAATCTGGGTAAGGGTGAGGACATCGATGATGTTCTTGTCAAGGCCATTGAAGGGTCAAAGATAGCAATCATCGTGTTTTCAGAAACCTATGCTTCTTCCACATGGTGTCTTGACGAACTGCTCAAGATTCTTGAGTGTAAGAAACGGAAAGGACAGCTGGTTATACCAGTCTTTTACAAAGTCGAGCCTACAACTGTTCGGAAACAACGGGGTTCTTATGGGAAAGCCATGACTATTCATGAAGACAGGTTTGAAGATGACATTGAAAAGGTCCGACGATGGAGGTCGGCTTTGTGCAAAGCAGCCAGCATATCGGGTTGGGATACTAAACATAAGATCGCAGGTGATCTTATTAAAGACATAGTCAAAGATGTGTCTGGAAAATTGAAAACCCTTGCATCGAATGGAGACAACAGGTTGTGGTTCTTTGGCGATTCAAGCAAGTTTCTTGAATTGAACGATGGATTGAGATATATATTAAATGCGATATCTGAGAAGGGAACCTTTGGGATGCGACACATTGTTGCATTGACAGACAACTCGAAGGTGATGGCCGTGAAAAGATTAGAGAAAGTGAGAATTTCAAACAAGGATTTCAAGAGCGTCATTGAACCTATTGGAGCAATGTATCATCAAAATTTGCTCAAACTTAGGGCTTACTATTGGAGTAAGGAGGAAAAACTCCTATTTTATGATTTCAAGCCAAACCGAAGCCTACACTTACATTTGCATGGCAACGAGCGCAGCAAAATGATAATGGATTGGGAAATGAGATTGAAAATTGCTGTTCAAACTGCTCGTGGAATCACATACATTCATGAGTGTCACAATCTTTCCCATGGAAACATAAAATCATCTAACATTATCCTTACAGATTTATATGGCGCCCGTGTGTCAGAATATTGTTTAACACCACTTTATGATAAAAATGATGGCTACTGTGCTCCTGAAGTCCGTCGTGACAGAGTAACCCTCGAGAGTGATGTCTACAGCTTTGGAGTAGTGCTTATGGAACTTGTGACTGAAAAGAATCCCACTAGCTTCAAGAAGGATGAAGGTGGTCTTCCCAGATGGGTGAAGTCCATGGTTGAAAGGAACTCGATTGATCAAGTAATTCCTAATCAGTTCGATTATCAAGATTCAATGGAAATGTGTGAGCTGTTGCAAGTTGCAATTGCATGTACTGTACCAAATCCTGATGAACGTCCTACAATGCGTGAAGTGACCCAGTCAATCAAACAGCTCAAGCAATCCAGCATGAAAGGTTATCTGCCTTCGATGGAGTGTAACACAGCAGATAACATAACGTTTAACTATACGCGAGTGACATATGATGACAGGGGATATCCTAAAGTACACCAGTGGACAGAGGTCAAACGCCAAGGAGATTTAAGTAGGATATCTATGTCCAGTTAG 1554 0.4131 MARGQISRSTYDVFLSFRGEDTRHGFTKYLYDALTQNNIKVFMDGNNLGKGEDIDDVLVKAIEGSKIAIIVFSETYASSTWCLDELLKILECKKRKGQLVIPVFYKVEPTTVRKQRGSYGKAMTIHEDRFEDDIEKVRRWRSALCKAASISGWDTKHKIAGDLIKDIVKDVSGKLKTLASNGDNRLWFFGDSSKFLELNDGLRYILNAISEKGTFGMRHIVALTDNSKVMAVKRLEKVRISNKDFKSVIEPIGAMYHQNLLKLRAYYWSKEEKLLFYDFKPNRSLHLHLHGNERSKMIMDWEMRLKIAVQTARGITYIHECHNLSHGNIKSSNIILTDLYGARVSEYCLTPLYDKNDGYCAPEVRRDRVTLESDVYSFGVVLMELVTEKNPTSFKKDEGGLPRWVKSMVERNSIDQVIPNQFDYQDSMEMCELLQVAIACTVPNPDERPTMREVTQSIKQLKQSSMKGYLPSMECNTADNITFNYTRVTYDDRGYPKVHQWTEVKRQGDLSRISMSS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01119 517 Gene3D Transferase(Phosphotransferase) domain 1 281 478 - -
Pte5g01119 517 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 158 464 IPR046959 -
Pte5g01119 517 Gene3D - 5 181 IPR035897 -
Pte5g01119 517 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 153 IPR035897 -
Pte5g01119 517 Gene3D Phosphorylase Kinase; domain 1 206 279 - -
Pte5g01119 517 ProSiteProfiles Protein kinase domain profile. 204 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01119 517 Pfam TIR domain 11 181 IPR000157 GO:0007165
Pte5g01119 517 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 177 - -
Pte5g01119 517 SMART till_3 10 150 IPR000157 GO:0007165
Pte5g01119 517 SUPERFAMILY Protein kinase-like (PK-like) 212 465 IPR011009 -
Pte5g01119 517 Pfam Protein kinase domain 213 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01119 517 ProSiteProfiles TIR domain profile. 9 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01119 Pte-Chr5 32135200 32140585 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01119 180 464 Receptor kinase-like Gene Family AT3G17840 43.377 3.28e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01119 Pkinase 5.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01119 - - gmx:100781597 229.95